Camellia sinensis (tea plant): 114315148 Help Entry 114315148         CDS       T07364                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism csin  Camellia sinensis (tea plant) Pathway csin04148   Efferocytosis Brite KEGG Orthology (KO) [BR:csin00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     114315148  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csin04131]     114315148 Membrane trafficking [BR:csin04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     114315148 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H AlaDh_PNT_N zf-HC5HC2H_2 TPR_MalT Motif Other DBs NCBI-GeneID:  114315148 NCBI-ProteinID:  XP_028117515 LinkDB All DBs Position Unknown AA seq 1005 aa AA seqDB search MVHSAFDSFELLNGCPTKIDAIESYGSKLLLGCSDGSLRIYGPESSVSDRSLPSVQTPEL RKEPYVLERTVNGFSKRPMVSMEVLGSRELLLSLSESIAFHRLPNLETIAVITKAKGANV YSWDDRRGFLCFARQKRVSIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRREYV ILNSTNGALSDVFPSGRIAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICWSEAP TTVFIQKPYTVGLLPRYVEIRSLRVPYPLIQTVVLRNVRHLLQTNYAMIVALDNSIYGLF PVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRAAKEQSIHIRYAHYLFENGSYEEAM EQFLASQVEITYVLSLYPSIVLPKSVVVPEPEKYMDITGDTPHLSRGSSGISDDMESPPA SQLLESDESAALESKKMSHNTLMALIKFLQKKRYSIIEKATAEGTEEVVSDAVGDNYVSY DSSRFKKSTKGRVNISISSGAREMAAILDTALLQALLLTGQSSAAVELLKGVNYCDVKIC EEFLQKRNQYVGLLELYKCNAMHREALKLLHQLVESSKSDQPQAELIQKFKPEMIIDYLK PLCGTDPMLVLEFSMLVLECCPTQTIELFLSGNIPADLVNSYLKQHAPNMQATYLELMLA MNENGISRNLQNEMVQIYLSEVLDWYADLNSQQKWDEKVYSPTRKKLLSALESISGYNPE TLLKRLPTDALYEERAILLGKMTQHELALSIYVHKLHVPELALSYCDRVYEPSLHQPSAK SYSNIYLTLLQIYLNPQKTTKNFEKRITNLVSTPSSGLPRIGAVVLAKTKASRLSRKIAE IEGAEDVRISPSSTDSGRSDGDADDLNEEAGSTIMLDEVLDLLSRRWDRINGAQALKLLP RDTKLQNLLPFLGPLLRKSSEAYRNFSVIKSLRESENLQVKDELYNQRKTVVKITSDSMC SLCNKKIGTSVFAVYPNGTTLVHFVCFRDSQSMKAVAKGAPRRKR NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgctttcgattccttcgagctcctcaatggttgccctactaagatagac gccattgaatcctacggttccaaactactccttggctgctccgatggatctctccggatc tacggcccagaatcctccgtctccgaccgatctctgccctctgtccaaaccccagagctc cgaaaggaaccctacgtcctcgaacgaactgtaaatggcttctcaaagaggccaatggtt tcaatggaggttttggggtcgagagagcttcttctttcgctctctgaatcgatcgcgttc catcgtcttccaaatttggagaccattgctgtgattaccaaggccaaaggcgcgaacgtt tattcatgggacgatcggagaggtttcttgtgcttcgcgaggcaaaagagggtctctatt ttcagacacgatggaggacggggatttgtggaggtgaaggaatttggagttcccgatacg gtcaagtcaatgtcttggtgtggtgagaatatatgtctggggattagaagggagtatgtg atactaaattccacaaacggtgcattgtccgatgtatttccttctggaaggattgcccca ccattggtggtgtctcttccatctggagaacttcttttggggaaggataacattggagtt tttgtggaccaaaatgggaagcttcttcaagaaggcaggatttgttggtctgaggcccct accactgttttcattcagaagccatatactgtaggcctcttaccaagatatgttgagata cggtctctccgagttccttatccattaatacagactgttgttctccgtaatgttcggcat cttctacaaaccaactatgccatgattgttgcattagacaactctatttatgggctgttt cccgttcctcttggtgcccagatagtacagttaactgcatctggaaattttgaggaagct ttggctctgtgtaagctgctcccacccgaggattcaagccttcgagctgcaaaggagcag tcaattcatataagatatgcacactatctatttgagaatgggagctatgaggaggctatg gaacagtttttggcatctcaagtagaaatcacatatgtgctttctttatatccatctatt gtccttccgaaatcagttgtggtacctgaaccggagaagtatatggacatcaccggagat actccgcacctgtcaagaggttcgtcgggtatatcagatgatatggaatccccacctgct tcacagctgttggaatccgatgagagtgctgcacttgagtccaagaaaatgagccataac acgctaatggctctcatcaagtttttgcagaagaagagatacagcataattgaaaaagcc accgctgagggaactgaggaagttgtttcagatgctgttggggataattatgtatcgtat gattccagtcggtttaagaaatcaaccaagggccgagttaacatttccattagctcaggt gctagagagatggcagcaatactggacacagcactactccaagctctgcttctaactgga cagtcttcagctgctgtggaactactgaaaggtgttaactattgtgatgtaaaaatatgc gaagagtttctgcagaaaaggaatcaatatgttggcttgctagaactctacaaatgcaat gcaatgcacagggaagctctcaagcttttgcaccaattagtagagtcatcgaaatcagac cagccacaagcagagctcatccaaaagtttaagcccgagatgattattgactatctcaag cctctctgtgggactgaccctatgcttgtgctggagttctcaatgctcgttcttgaatgc tgtccaacacaaacaattgagctctttttgtctggaaatattccggcagatttggtgaat tcttacttgaaacagcatgctccaaatatgcaggccacgtatttagaacttatgcttgcg atgaatgaaaatggaatctctagaaatttgcagaatgaaatggtgcaaatctatctctcc gaagtgcttgattggtatgcagacctaaattctcaacagaaatgggatgagaaagtttat tccccaaccaggaagaagttattgtctgctttggaaagtatctcagggtataacccggag actctgttaaagcgacttccaacagatgctttgtatgaagagcgtgcaattttattggga aaaatgacccaacatgagcttgccttatcaatatatgttcataagcttcatgtacctgaa ctggcactgtcctactgtgatcgcgtttacgagccttcacttcatcaaccctctgcaaaa tcttatagcaacatctacctcactcttctgcaaatatatttgaatcctcaaaagacaaca aaaaactttgaaaagcgaatcactaatctggtttcaactccaagttctggtcttccaagg attggtgcagtggttttagccaaaaccaaagcaagtcgtttatctcggaaaattgcagaa atagagggtgcagaagatgtccgaatcagtcccagcagtactgacagtgggaggagtgat ggtgatgcagatgatctcaatgaggaagcaggttctacgattatgttggatgaggtactt gatctgttgagccgacgatgggacagaatcaatggagctcaggcactcaaactattacca agggatactaagttacagaacttgcttccattccttggacccctactgagaaaatccagt gaagcataccggaacttttctgttatcaagagtttgagagagagcgagaacctgcaggtc aaagacgaactttataaccaaaggaaaacagtggtgaagattactagcgatagtatgtgc tccctttgcaacaagaagatagggactagtgtttttgcagtctaccccaatggtacgact cttgtgcacttcgtttgctttagagattcacagagcatgaaggctgttgctaaaggcgca ccgcggcgtaagcgatga

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