KEGG   Camellia sinensis (tea plant): 114315770
Entry
114315770         CDS       T07364                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    114315770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csin04121]
    114315770
   03036 Chromosome and associated proteins [BR:csin03036]
    114315770
Enzymes [BR:csin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114315770
Ubiquitin system [BR:csin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114315770
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     114315770
    Noncanonical PRC1 (PRC1.1)
     114315770
    Noncanonical PRC1 (PRC1.3/1.5)
     114315770
    Noncanonical PRC1 (PRC1.6)
     114315770
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-RING_6 zf-RING_11 zf-Nse
Other DBs
NCBI-GeneID: 114315770
NCBI-ProteinID: XP_028118175
LinkDB
Position
Unknown
AA seq 457 aa
MPSQKRNSSSDNNLLHHDDSQQQHSRRKQSRRQRGGAEDDDEDERDYEQDEEEEEQVKEE
DEDSEDEDSDGSRSSDDPANQSEWVLVKLPALRTYVQCPICLGIIKKTRTVMECLHRFCR
ECIDKSMRMGNNECPACRTHCASRRSLRDDPRFDALIEILYDDIEKYEEEELAFHEEEKT
RNKQIQASIAQIFRRQSEALVTRRKLGKDTDSASGSRLPRKYSRRRRNTRETEHEGSDDE
DENNHDANKDSSSNDERTTEIKQRRYKRKAGAQSSQPSPSAANSDGGGNENDLEASRESK
GTSSGPVRNTEMLAWGGGGARSKSVRNTRIMKLAKYLENAKDNDELDVHLTLISLDKQRT
ASSKELYLCCPPCFSVKSLKEYVSRETQLQAEDIEILLGKKHLHTNGLQSTRNASTLTEN
EAVLQNLKDQETLAGLGAKCDQDNNHLVLAYRVKKRD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgccttcacagaagcgtaattcgtcttctgataataatcttctacaccacgacgactct
cagcaacagcattcccgccgcaagcaatcgcgacgccaacgaggaggagctgaagatgat
gatgaagatgagcgagactacgaacaagatgaagaagaagaagaacaagtgaaagaagag
gacgaagactctgaagatgaggattctgatggaagtcgttcatctgacgaccctgcaaac
caatccgaatgggttcttgtgaaactgccagcgcttcgtacgtacgtacaatgtccaata
tgtctagggatcattaagaaaacaagaactgtgatggaatgtttgcaccgcttttgcagg
gagtgcatcgacaagtcgatgcgtatggggaacaatgagtgtcctgcttgccgcacacat
tgcgccagtcgacgttctttgagagatgatcctcgatttgatgccctgattgaaatttta
tatgatgatattgagaaatatgaagaggaggaactggcttttcatgaagaggaaaagact
cgcaataagcagattcaggcatcaattgcccagatttttcgtcgacaatctgaagcactg
gtcactagacgcaaattgggtaaagatacagattctgcatcaggttcaagattaccgcgc
aaatattctagaagaagaagaaacaccagggaaactgagcatgaaggatctgatgacgag
gatgaaaataatcatgatgcgaacaaagattcatcttcgaatgatgagcggacaacagaa
attaagcagaggaggtacaagagaaaagcaggggcacagtcctcccagccttctccatca
gctgcaaattcagatggtggaggcaatgaaaatgacttagaagcaagcagagaaagcaaa
ggtacttcttctgggcctgtgcggaatacagaaatgcttgcttggggtggaggtggtgct
cggagcaagagtgtccggaacacccgcataatgaaactggctaaatatctcgaaaacgca
aaggacaatgatgagttagatgttcatctcacccttatttctttggacaaacaaagaacg
gcaagttcaaaggagctgtacctctgttgcccgccatgcttttctgtcaaaagcctcaaa
gaatatgtttctcgcgagacacaattacaggctgaagatattgaaatactactagggaag
aagcacctgcataccaatggtctgcagtccacccgcaacgcttcaaccttaacggaaaat
gaagctgtactacaaaatttgaaagaccaagaaactttggcggggctcggagccaaatgc
gatcaagataataaccatttggttctggcttatagggtgaagaagagagattag

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