Camellia sinensis (tea plant): 114316280
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Entry
114316280 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csin01009
]
114316280
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114316280
03041 Spliceosome [BR:
csin03041
]
114316280
Protein phosphatases and associated proteins [BR:
csin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114316280
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114316280
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114316280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
RNA_bind
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
114316280
NCBI-ProteinID:
XP_028118740
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MELEVSSPKARGLSPSDCVSDPEEQEISDDDDDDRNHKHRRRETRSQSLERDAMEQVLIR
PYRKRNKPFENGHPYRENDSQSSETWKSYNMSPLEKDLSAKFDKRRPGFTTFHRAPNRVN
QSFSAELGPGRGGGRESGSWSQRDPRFISIDIASQMVPQGSVAPSLFPGRGLPNVSNSQN
ASWXAFGLIPGMPNGGMDTLHSLVAGTRPSISPSLNIGLPRQRCRDFEERGFCLRGDMCP
MEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPSVLPSVGAPSSTLINSKSLHSKSSKP
GMTDDGLGMNSVFTGSAGADFYDPDQPLWTNVCTETSTAPLGLNSSKLDETESLLDANPS
ARHHGRLFDGSDNEHLVRSTTTAAGPQSTSSSVWGRIATKNKLETKEKIDLTRNFSNYIE
NEAKDEQAPLTNLQEPARQGKRITVENIGSQAIDSSLKTQGDTGHTTRKPSQKALRTLFV
NGIPHKDNKREALLSHFKKFGEVIDIYIPLNSERAFVQFSKREEAEAALKAPDAVMGNRF
IKLWWANRDSIPDDGTSNLNSVSVTREVAAVSVPPHLSVAHSGKDNLQSAAPKLSVPNAS
VASVPASDHHHPKLVVSNSPKAPPPLQKKLENLELLKEELRKKQELLDQKRNDFRLQLDK
LEKQATGPKGEVLSEQAAKRHKPGTVADVAKATTPRFADSGTVVASSLAEVMAEKNKFVE
DIVHQSSKPSTVATLQEPSSVKHSIRPLAPAGAPFVMNKFKLDNRPTTFKIIPPLPTGLA
NVAVLKEHFSAYGDLSAIELEDVESSDLVASKNCSAHISFTTRHSAERAFVNGKCWQGHN
LQLTWLPPSNSSNDNGTIREVAPVDSHKAAASGNGESEKLERKESGGERMEQDEDLQSSS
STNSSEKKCPKGDGC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagctagaagtttcatctccaaaggccaggggtctttctccttctgattgtgtcagt
gatcctgaagagcaagaaatcagtgatgacgacgacgatgatcgtaatcataagcatcgt
agacgggagacacggtctcaatctttggagagagatgctatggaacaagttctaataagg
ccatacagaaagagaaataaaccttttgaaaatggacatccttatagggaaaatgattct
cagtccagcgaaacctggaaaagttataatatgtcccctctggagaaagacctgtctgca
aagttcgataaacgacgccctggcttcaccacatttcatagagctccaaacagggttaat
caatcattttctgctgagcttggtcctggtaggggtggaggaagggaatctggttcctgg
agccaacgtgatcctaggttcatctctattgatattgcttctcaaatggttccacaggga
tctgttgctccaagtctgtttccagggagggggttgccaaatgtttcaaactcacaaaat
gcatcatggnntgcatttggactgattccaggaatgccaaatggtggtatggatacactc
cattccttggttgcaggaactagaccatcaatcagtccttcactaaatataggtcttcca
cgccaaaggtgcagagactttgaggagcgtggtttttgcctaagaggagacatgtgtcca
atggaacatggtgtcaatcggattgttgttgaagatgttcagagcctttcacagttcaat
ctccctgtatcacttccaagtgctcacctgctgggaacaccctctgttttaccttctgtt
ggtgctccttcaagcacattgataaatagcaagagtttacatagcaaaagtagcaagcct
ggaatgactgatgatggattgggcatgaatagtgtttttactggttcagctggtgctgat
ttttatgatcctgatcagcctctgtggactaatgtttgtactgagacttcaacagcaccg
ctaggactaaattcatctaagcttgatgaaactgaatctttgttagatgccaacccctct
gcccgtcaccatggcaggttattcgatggctctgacaatgaacacctggtgaggagcact
actactgctgctggacctcaaagtacaagttcatctgtgtggggaagaattgctacaaag
aacaaactggaaactaaggagaaaattgatttgaccagaaatttctcaaattatattgaa
aatgaagcaaaggatgaacaagcaccattaaccaatcttcaggaacctgcccgacaaggg
aagcggatcactgtggaaaacattggctcacaagcaattgattcatctctgaagacacaa
ggtgatactggacatactactcggaaaccttctcaaaaagcattacgtactctatttgtg
aatggcattcctcacaaagacaacaaaagagaggcccttctttcacattttaaaaaattt
ggagaggttattgacatttatattccattgaatagtgaacgagcttttgttcagttctct
aaaagggaagaggctgaggctgctctgaaggcacctgatgctgtaatgggtaataggttt
atcaagctatggtgggctaatcgggacagcattcctgatgatggaacaagtaatcttaat
agtgtttcagtaactcgtgaggtggcagctgtttcagttccaccccatctgtctgttgct
cacagtggaaaggataatctccaatctgcagctccaaaacttagtgttcccaatgcttct
gttgcttctgtgcctgcctctgatcaccatcaccctaagcttgtggtgtctaatagtccg
aaagccccacctcctttgcaaaagaagctggagaatttagagcttttgaaggaggaacta
cgtaagaagcaggaattgcttgatcagaaacgcaatgactttcggcttcagttggacaaa
cttgagaaacaagctacaggtcccaaaggtgaagtactgtctgagcaggcggctaagaga
cataaaccaggaacagtagctgatgttgcaaaagctacaactcccaggtttgctgattct
ggtactgtagtggcatcatcactagcagaagtgatggctgagaagaataaatttgtggag
gacatcgtgcaccaaagttccaagcctagtacagttgcgacactgcaggaaccttcaagt
gtgaagcattcaattcgtcctttggcaccagcaggggcaccttttgtcatgaataaattc
aaattggacaaccgtcccaccaccttcaaaattattccacctttaccaacaggccttgca
aatgttgctgttttgaaggaacacttctcggcttatggcgatctgtctgccatagagcta
gaagatgtagagtctagcgacttggtggcatccaaaaattgctccgcccatatttctttc
acaacacgtcattcagctgagagggcatttgtgaacggtaaatgctggcaaggccacaat
ttgcagctgacgtggctgccaccaagtaattctagcaacgacaatggtactattagagaa
gttgcacccgttgattcccataaagcagctgcctcaggaaatggagaatctgaaaaattg
gaaagaaaagaaagtggtggtgagcgtatggaacaggatgaagatctgcagtccagttcg
tcaacgaattcgtctgagaaaaagtgtcctaaaggagatggttgttga
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