Camellia sinensis (tea plant): 114317384
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Entry
114317384 CDS
T07364
Name
(RefSeq) regulator of nonsense transcripts UPF3
KO
K14328
regulator of nonsense transcripts 3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114317384
03015 mRNA surveillance pathway
114317384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114317384
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114317384
mRNA cycle factors
P-body specific factors
114317384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
114317384
NCBI-ProteinID:
XP_028119885
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MKGPLDRTKIVVRHLPPTMSQSALMEQIDARFAGRYDWLSFRPGKNSQKHPSYARAYIDF
KKPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPLQRVPKQWSKKDGREGSIFKDPEYLE
FLEVLAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRAAKGGTRRSLSNG
KPTRKAHGASSASPSSAPSRRGSDKRRISTTMYVLRDTAKSTSAKDKSTYILVPKQDDRQ
LSDKSVAIAAASGAEVSEEESGISGSTDTGKKKVLLLKGKEKEIPYVSGGMSLQQSASSV
KNSLGSSGFKQNQRREPSGRIIRSILLNKDARQSQSSSVVRSEQKIQASNLEKDKRPPRP
QNVQHFFKDTNGSLEDNVVGNGLHGVSSEKQEKRTRNKDRPDRGVWTPLRRSDGSHASDE
SLSSSASQSTQLQPYSAEGSHGEVKFDLSNARSGEFKTVGTGRSGFHSLDNGSHKHGGRR
GLAHNVKDLDGSSIVSEGKLLKKGGSSGYGSHEKQVWVQKPSAGS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccctctagatcgaacgaagattgtagtccggcacttgccgccgacgatgtcg
cagtcggcgctcatggagcaaattgatgcccgctttgccggacgctacgactggctttct
ttccgccccggcaagaacagccagaagcatccatcctatgctagggcctacattgacttc
aagaagccagaggacgttattgagtttgctgagttctttgatgggcatgtttttgtcaat
gagaagggtactcaattcaaaactattgttgagtatgctcctttgcaacgtgttccaaag
cagtggtctaaaaaagatgggcgtgaagggtccatatttaaagatccggagtatttggag
ttccttgaagttcttgcgaaacctgttgagaatcttcccagtgcagagatacaattggag
agaagggaagcggaacgtgctggtgccgcaaaggatgctcctatagtcacaccgctgatg
gattttgttcgtcagaaaagagctgccaagggtggaactcggaggtcgttgtctaatggg
aaaccgaccagaaaagcccatggagcatcttctgcaagtcctagttcagctccatcaaga
cgaggttctgacaagagaaggatttctactaccatgtatgttttaagggatactgcaaag
agtacaagtgccaaagacaaatcaacatacattttggttccaaaacaagatgatcggcag
ctttctgacaagtctgttgctattgctgctgcatctggtgctgaagtctcagaagaggaa
agtggaatttctggaagcactgatactgggaagaaaaaggtcctgcttttgaaggggaaa
gagaaagaaattccttatgtgtcaggtggcatgtcattgcagcagagtgcatcatctgtt
aaaaattcacttggttcaagtggtttcaaacagaatcagcgacgtgaacccagtggaagg
ataattagaagcatacttctaaacaaggatgcacgtcaaagtcaatcatcatctgtagtc
cgttctgaacagaaaattcaggcctcaaatctcgaaaaggacaaaagacctcctcgacct
caaaatgtccagcatttcttcaaggatacgaatggatcactggaagataatgtcgttggg
aatggtttgcatggtgtttccagtgagaagcaggagaaacgtacaaggaacaaggatagg
cctgatcgtggtgtttggactcctcttcgccgttcagatggatcacatgctagtgatgaa
tctttatcatcttcagcttctcaatcgacacagttacagccatattctgctgaaggaagt
catggagaagtgaaatttgacttgtcaaatgcaaggagtggggaatttaaaactgttgga
actggacgtagcggttttcactcactagataatggttcacataaacatggtggccgccgg
gggctagcacataatgtgaaggatttagatggctcttctatcgtaagtgaagggaagcta
ttgaagaaaggaggttcttctggctatggttcccatgagaaacaagtgtgggttcagaag
ccaagtgctggttcttaa
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