Camellia sinensis (tea plant): 114317456
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Entry
114317456 CDS
T07364
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
csin03015
mRNA surveillance pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114317456
09122 Translation
03013 Nucleocytoplasmic transport
114317456
03015 mRNA surveillance pathway
114317456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114317456
03041 Spliceosome [BR:
csin03041
]
114317456
03009 Ribosome biogenesis [BR:
csin03009
]
114317456
03012 Translation factors [BR:
csin03012
]
114317456
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114317456
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114317456
mRNA cycle factors
Stress granule specific factors
114317456
Spliceosome [BR:
csin03041
]
Complex C
Other components
EJC/TREX
114317456
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
Helicases
114317456
Translation factors [BR:
csin03012
]
Eukaryotic type
Initiation factors
eIF-4
114317456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
114317456
NCBI-ProteinID:
XP_028119981
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MAAVAGTSVVVPANRNRGGRMDEDEKLVFETSKGVEPIMSFDDMGIKDDLLRGIYNYGFE
KPSAIQQRAVLPIIQGRDVIAQAQSGTGKSSMIALTVCQIVDTSSREVQALIMSPTRELA
TQTEKVILAIGNFINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTR
AIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVRI
LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRS
NNFTVSSMHGDMPQKERDAIMAEFRAGETRVLITTDVWARGLDVQQVSLVINYDLPNNRE
LYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcgggaacgtccgtggtggtgccggcgaacagaaatcgcggcggtcgc
atggacgaagacgagaagctagttttcgagacgagtaagggcgtagaacccatcatgagc
ttcgacgatatgggtatcaaggacgatttgcttcgaggtatctacaactacggcttcgag
aagccatcggcgatccaacaacgggctgttttgcccattattcagggtcgcgatgtcatt
gctcaggctcagtctggtaccggaaagtcctccatgattgctctcactgtttgccagata
gtcgatacttcatcgagagaggtccaagcattgataatgtcacctacaagggaacttgca
actcaaacagagaaagttatattagccattgggaatttcattaatatacaggcccatgca
tgcgttggaggcaaaagtgtgggtgaggatatcagaaaactagaatatggagttcatgtg
gtgtctggaactccaggtcgagtttgtgacatgatcaagcggaggacattgcggactaga
gctatcaaattattgattcttgatgagtctgatgagatgttgagccgaggttttaaggat
caaatttatgatgtctacagataccttccaccagagcttcaagttgttttgatttctgcc
acccttcctaatgaaattttggagatgacgagcaaatttatgacagatcctgttaggatt
cttgtgaaacgtgatgagttgactcttgagggaatcaagcaattcttcgttgcagtagaa
agggaggagtggaaatttgatactttgtgtgatctttatgatacccttactatcactcag
gctgttattttctgcaacacaaagaggaaggtggattggctaactgagaagatgcgtagc
aacaactttactgtctcttctatgcatggagatatgccccagaaggaaagagatgcaata
atggccgagttccgtgctggtgaaacccgtgttctgatcacaacagatgtttgggctcgg
gggttggatgttcaacaggtttctctggtgatcaattatgaccttccaaacaatcgagag
ctttacattcatcgcattggtcggtctggtcgttttggacgcaagggtgttgcaataaac
tttgtcaaaagtgatgatatcaagattctaagagacattgagcagtattacagtacccag
attgatgaaatgccaatgaacgtggctgatttgatataa
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