Camellia sinensis (tea plant): 114317889
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Entry
114317889 CDS
T07364
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114317889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114317889
03009 Ribosome biogenesis [BR:
csin03009
]
114317889
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114317889
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
U1 related factors
114317889
Complex B
114317889
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
Helicases
114317889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Transformer
Motif
Other DBs
NCBI-GeneID:
114317889
NCBI-ProteinID:
XP_028120482
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MATAEPAPASLGPRYAPEDPTLPKPWQGLIDGSTGLLYYWNPETNITQYEKPSSLPPPLP
PGLPPSASTPKLAPIPSVRMMQSNSVVGQPGQQMTQTPQQQGQQTDSSQHPQLMPQIAQQ
HSSHLAQAGQQQGTQLAQAIQQQGHLTPQQLGQQTIQQPNQQVLLQSGQQMSHQSAQQMP
QQSMQQMQMPMYQGSQMGQSQGHQFTHQQMQYMAYQQSNIPQGQQNSQQPMQRTTQGHLF
PHQQEPKAGFQHREDIDSQQGKQIGLSPQIQQPGGPSVQTAPVGTNSIQMQQMGVQPGQA
QQFGSSSLNMQQHGSRVPLLQHSPRFQNQLDAAIMQNQQPSAAPVNLKMGFEENASRRVG
NEYYFNASNDRTAMIPQQPKLASIPMARNQQEMRVGVAPLPNAPHGIAGGLNSVAGPAVH
NIYGHAASGPAFPNNAMTRPPPMIMESTDAIDLSPVEVYCQKHEVTATGGDVPAPLMTFE
ATGFPPEILKELHFAGFSSPTPIQAQTWPIALQNRDIVAIAKTGSGKTLGYLIPAFILLR
QRRNNSQNGPTVLVLAPTRELATQIQDEVLKFGRSSRVSCTCLYGGAPKGPQLKELDRGA
DIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMY
TATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQHVEVVPQMEKQRRLEQILRAQE
RGSKVIIFCSTKKLCDQLARSIGRNFGAAVIHGDKSQGERDWVLNQFRSGKSPILVATDV
AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFSDQDWKYAADLVKVL
EGADQLVPPEVREMALRGGPNFGRNRGGPNRYDASGVGGRWDSGGRSGTRDGGFGGRGGM
RDGNFGGRGGMRENNFGGRGGMRDGGFGGRGGMRDGGFGGRIGMREGGFGGRGGMRDGNF
GGRGGGHVGWDRNERAPHDRYNNMDGRGRGYGRGPGRFDNRRDVANRSRGRSYSSSPERV
RTWGYSRSRSRSRSRSWSRSRSRSRSWSRSRSRSRDRRERPRKTKFDQMEPSMPVSGPPP
ESRMSPMSLSTQANAISGVELPGQLPPVENVEPEHLEAAADTHEPPCNLVDES
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagagccagcaccggcttcccttggtcctcgttatgcgcctgaggatcct
actctgccaaaaccctggcagggattaattgatggaagcactgggcttttgtactactgg
aatcctgaaacaaacatcactcagtatgaaaagccatcctctttgcctcctccattgcct
ccaggcttgcctccctcggcttctacacccaagctggctcctataccaagtgttcgaatg
atgcaatcaaatagtgttgtgggccaaccagggcagcaaatgacacagaccccacaacag
caagggcaacaaacagactcgtcacaacatccccaactaatgccacaaattgctcaacag
catagctcacacttagcacaagccgggcaacaacagggaacacaattggctcaggccatt
caacagcagggacatttaacaccacaacaacttgggcaacaaacaatacaacaaccaaat
cagcaagttctattgcagtcaggacaacaaatgtctcatcagtcagcacagcaaatgcca
caacaatcaatgcagcaaatgcaaatgccaatgtatcaaggctcacaaatggggcaatca
caagggcatcaatttacacatcaacagatgcagtacatggcatatcagcagagcaacatt
ccacaggggcaacaaaattcgcagcaaccgatgcagcgtactacacaggggcatctattt
ccccatcaacaggagccgaaagcaggattccagcacagagaggatattgattctcaacaa
ggaaagcaaattgggttgtctccgcagattcaacagcctggtgggccatctgttcaaact
gctccagtgggaactaattccattcagatgcaacagatgggcgtgcaacctggtcaagca
caacagtttggtagctcctctctcaatatgcaacaacatggctctcgggttccattgctg
caacatagtcccaggtttcaaaatcagttggacgcagcaataatgcaaaaccaacagcct
agtgcggcccctgtcaatttaaagatgggttttgaagaaaatgcatctagaagagttggg
aatgagtattacttcaatgctagcaacgacaggactgctatgattccccagcagccaaag
cttgcttctatacccatggctagaaatcagcaggagatgagggtgggtgttgctccactt
cctaatgcccctcatggtattgctggtggactaaactctgtggcagggcctgctgtgcat
aacatttatggtcacgcagccagtgggccagcctttccaaataatgctatgacaaggccg
cctccaatgattatggaatccacagatgctattgatctctcaccagttgaagtatattgt
cagaagcatgaagttactgcaacgggtggtgatgttccagctcctctcatgacgtttgaa
gccactggctttcctccagagatacttaaagagttgcatttcgcaggtttctcttctccc
acacctattcaggcacaaacatggccaattgcgttacaaaatagggacatagtggctatt
gccaaaacaggatctggaaaaacattgggctatctgatcccggccttcattcttctaaga
caacgccgtaataattctcagaatggcccaacagttttggtcttagctccaactcgagag
cttgccacacaaatacaagatgaggttctcaagtttggtcgatcttcaagggtctcttgc
acatgcttgtatggtggagctcctaagggtccacaattaaaagaattggatcgaggggcg
gatattgtcgtggcaactcctggtcggctcaatgacatccttgaaatgaagaaaattgat
tttgggcaagtttctcttcttgtgcttgatgaagctgatcggatgcttgacatgggtttt
gaaccccaaatacgtaagattgtgaatgagattcctccccgacggcaaactcttatgtat
acagcgacctggcccaaggaagtgagaaaaatagcaagtgatcttcttgttaatcctgtt
caggtgaacataggcagtgtcgatgagctcgctgcaaataaatctattactcagcatgtt
gaagtagttcctcaaatggagaagcagaggcgcttggagcagattcttagggcccaagaa
cggggttcgaaggtcattatattctgttcaacgaaaaagttgtgtgaccagcttgcacgt
agtattggacgtaattttggggccgctgtaattcatggagacaagtctcaaggcgagaga
gattgggtgctgaatcaattccggtctggaaagtccccgattttagttgccactgatgtt
gctgcacggggacttgacataaaagatataagggttgtgatcaattacgattttccaact
ggggtcgaggattatgtccaccgaattggaagaactgggagagctggggccactggagtg
gcatacacctttttctctgatcaggactggaagtatgcagctgatctggtaaaagttctg
gagggggctgaccagctggtgcctccagaagtacgagagatggctttgcgtggtgggccc
aattttggcaggaatcggggtgggccaaaccgctatgacgctagtggtgttggtggtcgt
tgggattctggtggccgtagtggcacgagggatggtggttttggtggccgtggtggaatg
agagatggcaactttggtggccgtggtggaatgagggagaacaattttggcggccgtggt
ggaatgagggatggtggctttggcggccgtggtggaatgagggatggtggctttggaggg
cgcattggaatgagggaaggcggctttggtggccgtggaggcatgagggatggcaacttt
ggtggccgtggtggtggtcatgttggctgggataggaatgaacgagccccacatgataga
tacaacaatatggatgggcgtggacggggttatggtagggggccaggacggtttgataac
agaagagatgttgcaaaccgcagcagaggtagaagttatagctcaagtcctgaaagggtt
cgaacatggggctatagtagaagccgtagccgtagccgaagccgaagttggagtcgaagc
cgaagccggagtcgtagctggtctcgcagccgtagtcgcagccgtgacagacgtgaaaga
ccccgtaagacaaaatttgatcagatggaaccctcaatgccagtatctgggcctcctcct
gaatcaaggatgtctcctatgtctctgagcacacaagccaatgcaatttctggagttgag
cttcctggccagttaccaccggttgagaatgttgagccagaacatctagaggctgcggct
gacacacacgaacccccatgcaatttagttgatgaatcttaa
DBGET
integrated database retrieval system
