Camellia sinensis (tea plant): 114318369
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Entry
114318369 CDS
T07364
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114318369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114318369
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114318369
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114318369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
BAR_4
Motif
Other DBs
NCBI-GeneID:
114318369
NCBI-ProteinID:
XP_028121036
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDSRKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLEASITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEFFDEFSDVDELYNTLPLDKVES
LEDLVAIVPPGLAKGVGTTSAVLSVKTSLTAPPAQPPATVTSSVQQGTSIQEQVEETASQ
DSISDQVARTPTKNSPIGSSSPTTPVGSHATPGMVNASTHNLSIASAAPVILPGPSSVRG
VLENAGAAASSSSLNLSISAKEEESASFPGRKSSPALAETGLRGIARGGLTTLPPTSVTH
SSGSAIPSNGALGAVPSASEMTKRNILGTDERLGSSGMVQPLVSPLSNRMIMPQAAKAND
GAGSADGGNIGEAAVMAGRVFSPSVVSGIQWRPGSSFQNQSEVGQFRGRTEIAPDQREKF
LQRFQQVQQQGQSNLLGMPPLGGGNHKQFSAQQQNSLLQQFNSQGSPVLPQVGLGLGVQA
PGLNTVASSSQQQPNSIHQQSAQQALISTGPNDAEVGHAKLEETQQQQNLSDDSTAEPVP
SSGLGMNLINDGDLKASFPVDTPAGASGSLTESAQVPRDIDLSPGQPLQSNQTSGSLGVI
GRRSVSDLGTIGDNLGGSSTNSGGMHDQLYNFQMLEAAYYKLPQPKDSERAKSYNPRHPA
ATPPSYPQSQAPIVNNPAFWERLGAESYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRY
HRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFHITNDEMQHGWCQRIKTEFTFEYNFLEDE
LVV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtcgaaaactacagggtgaaatcgatcgtgttctgaagaaagttcaagag
ggcgtcgatgtttttgatagcatctggaacaaggtttatgacacagacaatgcgaatcag
aaggagaagttcgaggccgatttgaagaaggagatcaagaaactccagaggtacagagat
cagatcaaaacatggattcagtccagtgagatcaaggataagaaggttagtgcctcttat
gagcaggctctgatggattctcgcaagctcattgagcgtgaaatggaaaggtttaagata
tgtgaaaaggaaactaagacaaaagctttctccaaggaaggcctgggccaacaacctaag
acagatccaaaggagaaggctaaatcagagacaagagattggttgaacaatgtggtggga
gagttggaatctcaaattgatagctttgaagcggagattgaaggtctctctgttaagaaa
gggaaaacaaggcctcccagattgacacatttagaggcatccattacccgacacaaggct
catataatgaagttagaattgattttaaggctattggataatgatgaactaagtcccgag
caggtcaatgatgttaaagatttcttggatgactatgtggagcgtaatcaggagttcttt
gatgaatttagtgatgttgatgaactttacaacactttgccattagacaaggtggagtct
cttgaagatcttgtagcaattgtgcctcctggtcttgctaagggtgttggtaccaccagt
gcagttttaagcgtaaaaacttctttgacagcaccaccagctcaaccacctgccacagtg
acatcttctgttcaacagggtacttccatccaggagcaagttgaggagaccgcttcccag
gacagtatttctgatcaggttgcaaggactccgactaaaaatagtccaattggttcttct
tctccaacaacaccagtggggagccatgcaactcctggtatggtaaatgcttcaactcat
aatttgtctattgcatcagctgctccagtgatccttccaggtccgagttctgttcgaggt
gtcttagaaaatgctggtgctgctgcatcttcatcttctttaaatctgtctatttctgct
aaggaagaagagtctgcaagcttccctggtcgaaaatcatctccggctcttgctgaaaca
ggacttaggggcattgctagaggtggcctaaccactcttccacctactagtgtaactcat
agttctggcagtgcaattcctagcaatggagcccttggtgctgttccttcagcttctgaa
atgacaaagagaaatatattgggaactgatgagagacttggtagtagtggcatggtgcag
cctttggtttcccctttaagtaatagaatgatcatgccccaggctgcaaaggctaacgat
ggggccggctcagctgatggtggcaacattggtgaggctgcagttatggctggcagggtc
ttctcaccctctgtagtttctggtatacagtggaggcctggaagttcctttcagaaccag
agtgaagtgggacagttccgtggaagaactgaaattgcacctgatcagagagagaagttt
ttgcagcgattccagcaggtgcagcaacaaggtcagagtaaccttcttggcatgcctcct
cttggtgggggaaatcataagcaattctctgcacaacaacagaactctctcttgcagcag
ttcaattctcaaggctcgcctgtcttgcctcaagttgggttgggacttggagtccaagca
cctggtcttaacactgttgcatcttcctcacagcagcagccaaattcgatccaccaacag
tctgctcagcaggcattgatatcaacaggaccaaatgatgctgaagtcggtcatgcaaaa
cttgaggagacgcagcaacagcagaatctatctgatgattcaaccgctgaacctgttcca
agttctgggcttggcatgaatctcatcaatgatggtgatttgaaagcttcttttccagta
gatacacctgcaggagcatctggctctttgacagagtctgcccaagtgccaagggatatt
gatctttctcctggtcagcctttgcaatccaatcaaacctctggaagccttggtgttatt
ggtcgaagaagtgtttcagaccttggcacaattggtgataaccttggtggatcatctaca
aattcagggggaatgcatgaccaattatacaattttcagatgcttgaggctgcttattac
aaacttcctcaacccaaagactctgaacgtgcaaagagctacaatccgagacaccctgca
gcgactcctcctagctatcctcaatcacaggcacccattgtcaataatcctgcattttgg
gaacgattaggagctgaatcttatggcaccgataccctattctttgcgttttactatcaa
cagaatacttatcagcaatatttggctgcaaaggagttgaagaagcaatcgtggagatac
catcggaaatacaacacatggtttcaacggcatgaagagcctaaggtgaccactgatgag
tatgaacagggcacatatgtttacttcgatttccatatcaccaatgacgagatgcaacat
ggatggtgccaaagaatcaagactgaattcacttttgaatacaactttcttgaagatgaa
cttgtcgtatag
DBGET
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