Camellia sinensis (tea plant): 114318451
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Entry
114318451 CDS
T07364
Name
(RefSeq) uncharacterized protein LOC114318451 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114318451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114318451
03400 DNA repair and recombination proteins [BR:
csin03400
]
114318451
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114318451
Messenger RNA biogenesis [BR:
csin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
114318451
DNA repair and recombination proteins [BR:
csin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
114318451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF659
Motif
Other DBs
NCBI-GeneID:
114318451
NCBI-ProteinID:
XP_028121142
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MESTLKKFFGYSTFRPYQKEIIEKILEGRDCLVVMATGSGKSLCYQVPPLVAKKTAVVIS
PLLSLMQDQVMALRQRGIKAEHLSSAQTDSSVQRNAESGQFNILYMTPEKACSISTSFWS
NLLNMGICLLAVDEAHCISEWGHDFRVEYKQLGNLRNILTNVPFVGLTATATEKVRIDIT
DSLKMRDPYVTIGSFDRNNLFYGVKSFKRSSSFVDELVGEVSKCVANAGSTIIYCTTVKD
VEQIFKSLLEAGIKAGIYHGQMNNKAREESHRSFIRDESDVMVATIAFGMGIDKPNIRYV
IHYGCPKSLESYYQESGRCGRDGIASMCWLYYTRGDFGKADFYCGEASSENQRRAIMESF
MAAQHYCMLTTCRRKFLLDYFGEKCTPDKCGNCDNCTTSRNESDMSREAFLLMACMRACG
GNWGLGMPVDVLRGSRSKKILDAQVRQSSHFMGLGELSANWWKALGYQLISHGYLTETIR
DVFKFVCVSPKGMQFLSSSKPDHQPPLVLPVTDELSGNEKPRNKLGEVKEFIGLSPLEYE
GLSEAEAQLYKMLLEERMKLARAVGTAPYAICGDQTLKKIVLTRPSTKARLANIDGVNQH
LLTKYGDHFLRSIQRLSQGLNLSLDDDASIQPNITKPVYTTPNQERKLTPARFEAWRMWH
EDGLSFQKIANFPGRSAPVKEDTVIGYIVDAAQEGCAIDWIRFCREIALTRELFANIQAA
ILKVGSKDKLKPIKNELPEEISYALIKVCLAIQDLGISAEVIPPGHCRADEHSNVTSVLL
PTSNHPCHTEGTREFRRSVENAVGHYTDDLLSPSKRHKVNGKEENSLAPEATESSMLSWL
ENYKDGVSLSDILKHFNGSTEESIVEMLSCLESEFLIFKKNNLYRLM
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggagtccactctaaagaaattcttcggttattcgaccttccggccgtaccaaaaagag
attatcgagaaaattttagagggaagagattgcttggtcgtcatggctactggaagtggc
aaatcattgtgctatcaggttcctccattggttgcaaaaaagactgctgtagtcataagc
cctcttttatctttgatgcaagatcaggttatggctttaagacaacggggcattaaagct
gagcatctctcgagtgctcaaactgactccagtgtgcaacgcaatgctgagagtggtcaa
tttaatattctgtacatgactccagaaaaggcatgttccatttctaccagcttctggtca
aatttacttaacatgggaatttgcctattggctgttgatgaagcacattgcatttcggaa
tggggtcatgatttcagggtggaatacaaacagctaggcaacttgcgcaatattcttaca
aatgttccatttgttggcttaacagcaactgctactgaaaaggttaggattgacattacc
gattccctgaagatgagagatccttatgtcactattggttcattcgatcgcaataatctc
ttttatggtgtcaaatctttcaaacgtagttcttcatttgtggatgagcttgtcggggaa
gtctctaaatgtgtggccaatgctggttcaactattatatactgtacgactgtcaaagat
gttgaacagattttcaagtcacttcttgaggctggaatcaaggctggaatatatcatggt
caaatgaacaataaagctcgggaggagtcgcacagatcatttataagagatgaatcggat
gtcatggttgcaactattgcttttggtatgggtattgataagccaaatataagatatgtg
atacactatggctgtccgaagagtttagagtcctattaccaggaaagtggacgatgtggt
cgagatggtatagcttctatgtgttggctttattatacaagaggcgactttggaaaagct
gacttctactgtggagaagcaagctcagaaaatcaaagaagagctattatggaatcgttt
atggctgcacaacattattgtatgctgacaacttgtagaagaaagtttttgctggactat
tttggggaaaaatgtacacctgacaaatgcggaaattgtgataattgcaccacttcaagg
aacgagagtgacatgtctagagaagcttttcttttaatggcttgcatgcgagcatgtggg
ggtaactggggcctcggtatgcctgtagatgttcttcgcggatctcgatccaagaaaatt
ctcgatgctcaagttcgacaaagctcccatttcatgggcttgggagagttatcagcaaat
tggtggaaagcactaggttaccaattaatttctcatggttatttgactgagactattaga
gatgtctttaagtttgtatgtgtgagtcctaaaggaatgcagtttctgagctcttccaaa
cctgatcatcaacctccattggttctgccggtgactgatgaattgtctggcaatgagaaa
cctagaaacaagctaggtgaagttaaagagttcattggtttgtctcctctggaatatgag
ggtctgtcagaggctgaggcacaactctataaaatgcttttagaggagagaatgaagctt
gcaagagctgtcggaactgctccatatgctatatgtggtgatcaaacattgaaaaagata
gtattgacaaggccatctactaaagcgaggctagcaaacattgatggtgtcaaccagcac
ctcttgacaaagtatggggatcattttcttcgtagtattcaacgtctatcacaagggttg
aacctttctttggacgacgatgcaagcatacaaccaaatattacaaaaccagtgtataca
acaccaaaccaagaaaggaaattgacaccagcaaggtttgaagcttggagaatgtggcat
gaggacggtctctcatttcagaaaattgctaattttcccggtagatcagctccagttaaa
gaggacactgttattggatacatcgttgatgctgcacaagaaggatgtgcaattgattgg
atcagattctgtcgggagattgcactaactcgtgagctgtttgcaaatattcaggccgcc
atcttgaaggttggttcaaaagacaagttgaagcctatcaaaaatgagttgccagaagag
ataagttatgcacttatcaaggtatgtttggcaatacaagatttggggatttcagcagaa
gtaattccaccaggtcactgcagagctgatgaacattctaatgtaacatcagtgttacta
ccaacatccaatcatccatgccacacggaaggaactcgtgaatttcgaagatcagttgag
aatgctgttggtcattatactgatgatctactttcccctagcaaacgacataaagtcaat
ggaaaagaagaaaattcacttgcaccggaggcaacagagagttcaatgttaagttggctt
gagaactacaaagatggggtttccctatctgatattttgaagcacttcaatggatccacg
gaagagtctattgttgaaatgctgagctgccttgaaagtgagttcttgatatttaagaag
aataacctgtataggcttatgtaa
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