Camellia sinensis (tea plant): 114318508
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Entry
114318508 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114318508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114318508
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114318508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GRAM
Motif
Other DBs
NCBI-GeneID:
114318508
NCBI-ProteinID:
XP_028121215
LinkDB
All DBs
Position
Unknown
AA seq
2138 aa
AA seq
DB search
MPLFASEEEYERCSHDASLVAEKADTFIKEVYNQLETVKAQADAAAITAEQTCSLLEQKY
VSLSSDFAKLESQNSQLNSALQQRLSELAQVQAGKHQIHLKSIEKDGEMERLSTEVSELH
KSKRQLIGLLEQKDLEISEKNAAVKSYLDKIVNLTDSAALREARVNEIEAELARSHASCT
RLSQEKELIERHNIWLNDELTTKVDSLIELRKAHSELDADMSAKIVDLERKLNESLSSLK
WNKDRVMEQEMKLTSLQEELSSSKDAAAANEERYSAEISTVTKLVELYKESSKEWSKKAG
ELEGVIKALDTHLSQVENGYKERLEKEISARKEFEKEAVYLKEKLEKCEAEVENSRKASE
LNLLPLSTYTTETWVDSVEGNDMVSNNRTVVPSIPIGVSGTALAASLLRDGWSLAKMYAK
YHEAVDAMRHEQLGRKQSQAILERVLYEIEEKAGVILDERVEHERLVEAYSVVNQKLQHS
LSEQTNLERTIREFKADLRRCERDYSIAQKEIVDLQKQVTILLKKXCRDVQLRCGSVGHD
YADYSTTFPVVELNADSDAEKVISERLLTFKDINGLVEQNVQLRSLVRSFSDQIENREME
LKEKFEVELQKHTDEAAAKVNAVLARAEEQGQMIESLHTSVAMYKRLYEEEHKLHSPYPR
TAEIAPDDGREDLMRLFEGSQEATKKAQEEASEHVRCLEEDLGKLRSEMISLRLERDKLS
LEANFAREKLDRFMKEFEHQRDETNAVISRNVEFSQLIIDYQRKLREGSESLRVAEELPR
KLSMEVSVLKHEKEMLLNSEKRACDEVRSLSERVHRLQASLDTIQSAEEVREEARRAERR
KQEEYIRQIEKEWAEAKKELQEERDNVRRLTLDREETMKNAMRQVEEMGKELANALNAVA
AAESKAAVAEARYSDMEKKIKSPETKIAGNDSECGISSPSTNDAISDLCVAREEIEKLRE
ETQVIKTHMLQYKSIAQVNETALKQMEFAHENFKSEADKMRMSLEAELLSAREQVKELER
ECSSKSKEASSSAAEREAALASALSEIDRLKQESSVKMSQIATMDIQISALKEDLEKEHQ
RWRDAQTNYERQVILQSATIQELTKTSQAMAALQYEASELHKLVDALKTENNELKARWDV
GKSMLEESKNVAENKYNEVNEQNKILHNRLEALHIKLAENDRDSAGISSGNSIQDPLLDT
GLHNVVNYLRRSKEIAETEISLLKQEKLRLQSQLESALKASETTQASLHAERATSRAMLF
TEEEFKSLQLQVREVNLLRESNMQLREENKYNFEECQKLREVAHKARMETEQLETSLREC
QTEVEAWKKEIEMQKIEKEHLEKRVDELLVSCKNIDVEDYGRMREDIKRMQTNLSEKVAQ
LEENKKLLSEKQVVISELEQDIAKSRIELNEREGRINESLQVEVSLKYEVERQKKLVAQL
KKKLENLSKEKEELSKENQVLSKQLEDYKQGRRGVGDALAEHAMKEKEKEKDTRIQILEK
TVERQREELKKEKDDHKTEKAKRLKTERTIMDSIKSVNQERNKLVDGLEKHKQALKRLSE
EFEKLKHAKTSLPEGTTVVQILSGTLLDDLSAAYFLAVENFERVAHLVSSELGAPLADIS
PVVDASSSGLAIGQSVPSQVPSILPAIGSTTSLPSAKPTEEREKRFTLPKSNVEARKTGR
KLVRPRIIKPEEPQGDTEMPEIEGSNNDGKSVSSHNLETQGSLTLLTHTTVRKRLASSTS
PELQEESLVQCGTSSDVEAPVLKKSKGSDFPQDGAEGQTAAVLENLETLPAVEEPSDAIG
DLPQGSNEEAIDAEKDDVETSGEQDEEPKVGGDNNQVELQSESNDVLEEIPYKQNESEGV
FDEGSKVLAEQDFQQSAVESGSEQEEGELVPDVADVESGGNMSGMVVESQEIGENQPEAA
ALAPPPVSSPVGDEETLVAAAATATATASRYQISSSSIGSLKLKQKKVDWKNKLGGKQDN
LANGIREHVRLGPKITETVKGKLSLGAKIIRVGGVEKIFMHNFSIREGEKLSKASQCYLS
TTAGPIAGLLFISTDKVAFCSDRSIKLSSPTGEFVRIRYKVLIPVGKILRAEESQNVKRP
SQKYIEIVTVDNFDFWFMGFLNYEKTSKYLEQAISQAR
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atgccgttattcgcgtcagaggaagagtacgagcggtgctcgcacgatgcgtctctggtg
gcagagaaggccgatacattcatcaaagaagtttacaaccaactcgagactgtcaaggca
caggcggatgcagcggctatcaccgccgagcagacctgctccctcctcgaacagaagtac
gtatccctatcctccgatttcgccaagcttgaatctcaaaactcccaactcaattctgcc
ctccaacaacgtctctctgagctcgcccaagttcaagctgggaagcaccaaatccatctc
aaatccattgagaaagatggagagatggagcggttgtctactgaagtctctgagcttcac
aaatccaagaggcagttaattggtttgttggagcagaaggatttagagattagtgagaaa
aatgctgccgtcaagagctatctcgataagattgtcaacttgactgacagtgctgcatta
agagaagctcgagtgaatgaaattgaggcagagttggcacgttctcatgcttcctgtact
cgtctttcacaggagaaagaacttattgagaggcataacatttggcttaatgatgagttg
acaaccaaagtagacagtctcattgagctgcgcaaagcacatagtgaacttgatgcagat
atgtctgctaagattgtagatcttgagagaaaattgaatgaaagtttgagctctttaaag
tggaacaaggatagagtgatggagcaggaaatgaagcttacatcgcttcaggaggagcta
agctcatctaaagatgctgctgcagccaatgaggagcgatattctgctgaaatatcaact
gttacgaagcttgttgaattatataaggagagttccaaagaatggtccaaaaaggcggga
gagcttgagggtgtgatcaaagctttggatactcatttaagtcaagttgaaaatggatat
aaagagaggcttgaaaaggaaatttctgcaagaaaagaatttgaaaaggaagctgtttat
ttgaaggagaagcttgaaaagtgtgaagctgaggttgagaacagtaggaaagcaagtgag
ctgaatcttcttcctctgagcacttacactacagaaacatgggtggattcagttgaagga
aatgacatggtcagcaacaatcgcacagttgtccctagtattcccataggtgtttcagga
acagcattggctgcttcacttctacgggatggttggagtcttgcaaaaatgtatgccaag
taccacgaggctgttgatgcgatgcgacatgagcaattgggaagaaagcagtcccaagca
atattggagcgggtcctgtatgaaatagaggagaaagctggcgtcattttggatgagcga
gtggaacatgagagattggttgaagcatactcagttgtaaaccaaaaactgcagcattct
ctttctgaacagactaatttggagaggaccatccgggaattcaaggctgatttgaggagg
tgtgaacgagactactctatagcacagaaggagattgttgatctccagaaacaggtgacg
atccttctaaagaaataatgccgagatgtacaacttcgttgtggatctgtgggtcatgat
tatgctgattacagtaccacttttcctgttgttgagttaaatgctgactctgatgctgaa
aaagttatttctgaaaggctgttgacctttaaggatataaatgggttagttgagcagaat
gtccagctccgaagccttgtgcgaagtttttctgaccagattgaaaatagagaaatggag
ctgaaggagaagtttgaggtagaacttcagaaacacactgatgaggctgctgccaaagtt
aatgctgtactagcgagagctgaagaacaagggcagatgatcgaatcacttcacacctct
gttgcaatgtacaaaaggttatatgaagaggagcataaacttcattcaccttacccccgc
actgcggaaattgctccagatgatggtagggaagaccttatgcgtctatttgaaggttca
caggaagctacaaaaaaggcccaagaagaggcttctgagcatgtgagatgtttggaagaa
gatttgggaaagttgaggagtgagatgatatcactacgattagaacgtgacaagttgtct
ctagaagcaaattttgcacgtgagaaacttgacagatttatgaaagagtttgagcatcag
agagatgaaaccaatgctgttatatccagaaatgttgaattctcacagttaataattgac
taccaacgaaagctacgtgaaggttctgagtctttgcgtgttgctgaggagctcccacga
aagttatcgatggaggtctctgtcttgaagcatgaaaaagagatgttgttgaactcagaa
aagagagcttgtgatgaagttcgtagcttgtctgagagggttcatcgtttgcaggctagt
ttagacactatccagagtgcagaggaagttcgtgaggaagcgagaagggcggagaggaga
aaacaagaggagtacattagacagattgagaaggaatgggccgaggctaagaaagagctt
caagaagagcgtgataatgttcggcggctcacacttgatcgagaagagacaatgaagaat
gctatgagacaagttgaggaaatggggaaagaattagctaatgccttgaatgctgttgct
gcagctgagtctaaggcagctgttgctgaggcccgatattctgatatggagaagaagatc
aaatctccagaaactaagattgctgggaatgacagtgaatgcggaatttcctctccctca
accaatgatgctatttccgacttgtgtgttgcaagagaggagattgaaaaactgagagag
gaaacacaagttattaagacccacatgctgcagtataagagcattgcacaggtgaatgag
actgcattgaaacagatggaatttgctcatgagaacttcaaaagcgaggcagataaaatg
aggatgtcacttgaagctgaacttctgtcagctagggagcaggttaaagaacttgaaaga
gaatgtagttcgaagtccaaagaagcatcatcttcagctgcagagagagaagcagctctt
gcttctgctttgtcagaaattgaccgacttaagcaagaaagttctgttaagatgtcccaa
attgctacaatggatatccaaatttctgctttgaaggaagatttggagaaggagcatcag
agatggcgtgatgctcaaaccaactatgaaagacaggttatactgcagtcagcgacaatt
caagagttgacaaaaacatctcaagctatggctgctttgcaatacgaggcatctgagctg
cataaattggttgatgcacttaaaactgaaaataatgagctcaaggccaggtgggatgta
ggcaagtcaatgctagaagaatcaaagaacgtagctgagaataagtacaatgaagttaat
gaacagaacaagatactgcacaataggctcgaggctttgcacattaaattagctgaaaat
gatcgtgattctgctgggatatcctctggaaactctattcaggatccactacttgacact
gggttacacaatgtggtaaattatctccgccggtcaaaggaaattgcagaaactgagata
tctttgctaaagcaggaaaagcttcgattgcaatcacagcttgagagtgctctaaaggca
tcagagactacgcaagcatcacttcatgctgagcgagcaacttcaagagcgatgttgttc
acagaggaagaatttaaatctctacaacttcaggttagagaagtgaacttgcttcgtgaa
agcaacatgcaactcagagaggaaaacaagtataattttgaggaatgccagaaattacgt
gaagttgcccataaagcaaggatggaaaccgagcaactggagacttcactgagagagtgt
caaactgaggtggaagcttggaagaaagaaattgaaatgcagaaaatagagaaagagcat
ttggaaaagagggttgatgagttgcttgtgagctgcaagaatattgatgtggaagattat
ggacgcatgagagaagatattaaacggatgcagacaaatctgagtgagaaggttgcgcag
ctggaggaaaataagaaacttctttccgaaaaacaggttgtaatatcagaattggagcag
gacattgcaaagagcagaatcgaactaaatgagagggagggaaggattaacgaaagtttg
caagttgaggtttctctgaaatatgaggtcgagaggcaaaagaagttggtagctcaatta
aagaagaagctggaaaacttgtcgaaggaaaaggaggagctgagcaaggagaaccaagtt
ctttccaaacagttagaggactataagcaagggaggaggggcgtaggggatgcgttagct
gaacatgcaatgaaggaaaaagagaaggagaaagacacaagaatacagattctagagaaa
actgtagagaggcagagagaggagttgaagaaggagaaggatgaccataagacagagaaa
gcaaagcgtctgaagacagagaggacaataatggattctataaagtcagtcaatcaggaa
agaaacaagctggtagatgggcttgagaagcataagcaggccctaaagaggttgtcagag
gaatttgagaagcttaagcatgccaaaaccagtcttccagagggtacaacagtggttcag
attctttctgggactctcttggatgacctttctgctgcctattttctggccgtggaaaat
tttgaacgtgttgctcatttagtttccagtgaacttggagctcctctggcagacatttct
ccagtagtggatgcttcatcttcaggacttgctataggtcagtcagttccttcccaggtg
ccaagcatcttacctgcaattggctccacaacaagtttgccatcagctaaaccgacagaa
gaaagagagaagagatttactttaccaaaatcgaatgttgaagcccgtaaaacgggaagg
aagttagttcgacctcgtattataaagcctgaagagcctcagggagatacagagatgcca
gaaattgagggatccaacaatgatggaaagtctgtgtcctctcataacttagaaactcaa
ggaagcctaacgctactgacccatacaactgttcgcaaacgccttgcttcttcaacctct
cctgagttacaagaagagtcacttgttcaatgtggcactagctctgatgtggaagcacct
gtgctgaagaaatccaaaggctcagattttccacaagacggtgctgaaggacaaactgct
gctgttttggaaaatttggaaactctacctgctgtggaagaaccttcagatgctattggt
gatttgccccaaggttccaatgaggaagccattgatgctgagaaggatgatgtagagact
agtggggagcaggatgaggagccaaaggtgggtggtgataataatcaagttgagttgcag
agcgagagcaatgatgttttggaggagataccgtataagcaaaatgaatcagagggggtc
tttgatgaagggtcgaaggttcttgctgagcaggatttccagcagtcagcggtggagtct
ggaagtgagcaggaagagggagagttggtccccgatgtcgctgatgttgaaagtggtggc
aatatgtctgggatggtggtggagagccaagaaattggggaaaatcagcctgaggctgca
gcgctagctcctcctcctgtgagttcacctgtgggtgatgaggaaactctagttgctgct
gctgctactgctactgctactgctagccgataccaaatttcctcttcttcaattggatct
ctaaaattaaaacagaaaaaagtagattggaagaacaaacttggaggaaagcaagacaat
cttgcaaatggcatcagagagcatgtgagattagggcccaagatcactgaaactgtgaag
gggaaactgagcttgggggctaaaattattagagtaggcggtgtggagaagattttcatg
cacaatttcagcatcagagaaggagagaagttgtcaaaggcttcccaatgctatttatca
acaacagctggtccaatagcaggcctcctcttcatctccactgacaaggttgccttctgc
agtgatagatccatcaaattgtcttctccaactggcgagtttgttagaattcgttacaag
gtgttgatcccggtaggaaagatattgagagccgaggaaagccaaaatgtgaagagacca
tcacagaagtacatcgaaatagttactgtggataattttgatttctggtttatgggattc
ctgaattatgaaaaaacttcgaaatatcttgagcaggcaatctcccaagctcggtga
DBGET
integrated database retrieval system
