KEGG   Camellia sinensis (tea plant): 114319165
Entry
114319165         CDS       T07364                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114319165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114319165
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114319165
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114319165
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 114319165
NCBI-ProteinID: XP_028121965
LinkDB
Position
Unknown
AA seq 128 aa
MSWSGPDDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL
YSDIPLGLYVIRGENVVLIGELDSGKEELPPHMIQVSAAEMKRVQKAEREATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttggtcaggcccagatgatatcttcctttccacctcacttgcaagctatcttgac
aaaaagcttttggtcttgttgcgtgatggtcggaagctcttgggaatacttcgttctttt
gatcaatttgcaaatgttgttttagaaggggcatgtgagcgggttatagttggagatctt
tattccgacattcccttaggtctatatgtaatccgcggggagaatgttgtcttaatagga
gagctggactcgggtaaagaggagcttccccctcatatgattcaagtgtcagcagccgag
atgaaaagggttcagaaagctgaaagggaagccacagatttgaaaggctccatgagaaag
agaatggagtttcttgatcttgattag

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