Camellia sinensis (tea plant): 114319521
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Entry
114319521 CDS
T07364
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
csin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114319521
03083 Polycomb repressive complex
114319521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114319521
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114319521
Histone modification proteins
HAT complexes
HATB complex
114319521
HDAC complexes
Sin3A-HDAC complex
114319521
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114319521
PRC2.2
114319521
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114319521
Heterochromatin formation proteins
Other heterochromatin formation proteins
114319521
Chromatin remodeling factors
NuRD complex
114319521
NuRF complex
114319521
NuRF complex (fruit fly)
114319521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
114319521
NCBI-ProteinID:
XP_028122351
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MKERGGKGGQPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL
YLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIR
ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAQDSRPDLILTGHQDNAEFALAMCPT
EPFVLSGGKDKLVVLWGIQDHISSLASDPVSAKSPGSGGASTKNAAKAGGGTDKPVDSPT
IGPRGTYQGHGETVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSPVLKVEKAHDGDLH
CVDWNSHDVNLILTGSADTSVRMFDRRNLTSGGGGSPVHIFNGHNSAVLCVQWSPDKSSV
FGSSAEDGILNIWDHEKIGKKQDGLGTRVQNSPPGLFFRHAGHRDKVVDFHWNSCDPWTI
VSVSDDGESTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHILNCSS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagggggaaagggaggacagccgtcggtggacgaacgttacactcaatgg
aagtctctggtccccgttctctacgactggttagccaaccacaacctcgtctggccttct
ctttcttgccgatggggtccacagctagaacaagccacttacaagaatcgccagcgtctc
tacctttcagaacagactgatggtagtgttccaaacacacttgtcatagcaaattgtgaa
gttgttaaacctagggttgctgctgcagagcacatatcacagttcaatgaagaggcacgg
tctcctttcgtaaagaagttcaaaacaattatacatcctggagaggtgaatcgaatcaga
gagcttccacagaacagcaagatagtggctacacatactgacagtcctgatgttctcatt
tgggatgttgaggctcaacctaatcgtcacgctgtgttgggagctcaagattcccgtccg
gacctgatactgactgggcatcaggacaatgcagaattcgctcttgccatgtgccctact
gaaccttttgtgctctctggagggaaagacaaattggtggttttgtggggcattcaagat
cacatctcctctttggcatcagatccagtctctgcaaagtctccaggatctgggggtgcc
agcacaaagaatgcagcaaaggctggtgggggcactgataaacctgtagacagccctact
attggaccacgaggtacctatcaagggcatggagagactgttgaagatgttcagttctgc
ccttcaagtgcacaggagttctgtagcgttggtgatgattcttgccttatactatgggat
gcaagaacgggttctagtccagtcctcaaggttgagaaagctcatgatggtgacctgcac
tgtgttgattggaattcgcacgatgttaatctcattctgactgggtcagcggatacttct
gttcgtatgtttgaccgtcgaaacctcacttctgggggaggtggatcacctgttcatata
tttaatggtcacaattctgctgtcctttgcgttcagtggtctccagacaagtcatccgtc
tttggaagttcagcagaggatggcatcttgaacatctgggatcatgaaaagattggcaaa
aagcaagatggtcttggaacaagagttcaaaattctccgccaggcttattcttccgacat
gctgggcacagggataaggttgttgattttcattggaattcatgtgacccatggacaatt
gttagcgtatctgatgatggtgaaagtaccggtgggggtggtacactacagatatggcgg
atgattgacctgatttacaggccagaagaagaggtccttgccgagctagacaagttcaaa
tctcacatacttaactgttcatcttga
DBGET
integrated database retrieval system
