KEGG   Camellia sinensis (tea plant): 114320669
Entry
114320669         CDS       T07364                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03440  Homologous recombination
csin03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    114320669
   03460 Fanconi anemia pathway
    114320669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csin03032]
    114320669
   03400 DNA repair and recombination proteins [BR:csin03400]
    114320669
Enzymes [BR:csin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     114320669
DNA replication proteins [BR:csin03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    114320669
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     114320669
    Bloom's syndrome complex (BTR)
     114320669
   FA (Fanconi anemia) pathway
     114320669
SSDB
Motif
Pfam: DEAD RQC Helicase_C RecQ_Zn_bind HRDC ResIII Cob_adeno_trans
Other DBs
NCBI-GeneID: 114320669
NCBI-ProteinID: XP_028123528
LinkDB
Position
Unknown
AA seq 1209 aa
MKEQHMSGTNSVGGSKCGDKLPRVNWLQHANAHDSFSNQNKLLSSNFLYSLSAQKPCTGA
STSARSMACQVLNLQSVQATQVEKAWQVLSSRHLSCRNYAKPGKTVPVVKDVNANALQNV
RRTTQQSLSNVNNSFSGHMQTHTNLSGTNAKIGESTQCIGVSFPLHPSSVAEDGKVSKGQ
NERYTSMINSSFARATNGISSNHMAQTSQVKGSVDMSPDCIGDDDILENIDVDQIVLEHY
QSTCTPQPSISKLPPITPTVGKNNAARDETCLPPELCSNCSHGSMLGLCPEASNHLQDMK
DMLIAISNELLDNAADLSSDQIEKLRHDRLKLNKQVQQLEKYLQTIPVDEERQKSQFSAS
TAPPRAFQYGTPTFEFRIDSTRADAQSQIINRADGYDGWNSSSFSSSVDMFGASSFPVER
EPYVPKYVEVNYIEGSNDKKWSSRDFPWTNKLEASNKKVFGNHSFRPNQREVINATMSGH
DVFVLMPTGGGKSLTYQLPALICQGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEW
TDQQEIFRELCSDYCKYKLLYVTPEKVAKSDVLLRHLESLHARESLARIVIDEAHCVSQW
GHDFRPDYQGLGLLKRKFPNTPVLALTATATASVKEDVVQALGLVNCIVFRQSFNRPNLW
YSVIPKTKKCVEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGSMDP
AQRAFIQKQWSRDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ
RSSCVLYYSYSDYIRVKHMITQGAVEQSPLPSAYKRTNMDNSGRLRETNTENIRRMVSYC
ENDVDCRRLLQLIHFGEKFNSSHCKRTCDNCSKNKSFIEKDVTETAKQLVEVVKLTGQQF
SSSHIVEVYRGSLSQFVKKHKHETLKLHGAGKHLAKGEASRILHHLVVEDFLVEDVKKSD
FYGSVSSILKVNESKAYNLCVGVQKITLRFPSANACKLSKSEATPAKGLLRPGKQSPSEP
QHGVDVNLSAKLYAALRLLRTILIKEGGEGVLAHHIFGNATLHEMSVSIPRTKEELLEIH
GIGNVKLSKYGDRFLETIEATIKEHYKMEKISSGSNDSLDSIKRRRDAVRVSKDGDDFME
STGRSKKRALKKQNRSVEVVDFSEADYYNGSANVDLDFDDTDFDIENNVSDLNVERNAGG
RVLPYWSAQ
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgaaggaacaacacatgagtggaaccaattccgttggaggttctaaatgtggtgacaaa
ctgcctagagttaactggttgcaacatgccaatgcacatgatagtttttcaaaccaaaat
aagttattgagttcaaattttctttactcgttgtctgcacaaaaaccttgtactggagca
tcaacaagcgcaaggtcaatggcttgtcaggttctgaatcttcaaagcgtgcaggccaca
caagttgaaaaggcttggcaagttctttccagtcgtcatttatcttgcaggaactatgca
aaacctggaaaaactgtaccagttgttaaggacgttaatgctaacgcattgcagaatgtc
agaagaactactcagcaaagcctatcaaatgtgaataacagcttttcaggacatatgcaa
acacacacaaatttaagtggaacaaatgccaaaattggtgaatccacacagtgcattggt
gtttcttttccattacatccaagtagcgtagcagaagatggaaaggtttcaaaggggcaa
aatgagaggtatacatcaatgatcaatagttcttttgcacgagctacaaatggaatatcc
agcaatcatatggcacagacaagtcaagtgaaaggttctgtggacatgtctcccgattgt
attggtgatgacgacatactcgagaacattgatgtggaccaaatagttttggaacactac
caatcaacttgcacacctcaaccatcaatttcaaagcttccccctattactccaactgta
ggtaaaaataatgctgcaagagatgagacatgtttgccaccagagttgtgctcgaactgc
agtcatggttctatgctaggactttgtccagaagcgtcaaatcatttacaagatatgaag
gacatgctcattgccatatcaaatgagcttcttgacaatgctgctgacctaagttcagat
caaatagagaagcttcgccatgacaggttgaagctgaataagcaagttcaacagcttgag
aaatatcttcaaactataccagttgatgaggaaagacaaaaatcgcaattttctgcatcc
actgcccctcctagagcttttcaatatgggactccaacattcgaattcaggattgattcc
actagggctgatgcacagtctcaaatcatcaatcgtgctgatggatatgatgggtggaac
tcatcctcattttcatcttccgtagatatgtttggtgcttcctcattccctgtggagaga
gaaccgtatgttccaaagtatgttgaagtcaattatattgaaggttcaaatgacaaaaaa
tggagtagtcgggatttcccttggacaaataagctggaggccagtaacaagaaagtgttt
ggaaatcattcctttcggcccaaccagagggaggtgatcaatgctacaatgagtggacat
gatgtttttgttttaatgccaaccggaggaggaaaaagcttgacgtatcagctccctgct
cttatttgtcaaggaataacattggtaatttcacctcttgtgtcactcatccaagatcaa
ataatgcatctgttgcaggcaaacatacctgctgcttatttaagtgcgaatatggagtgg
actgatcaacaggagatatttagagagctttgctcagattattgcaaatacaagctttta
tatgtcacacctgagaaagttgcgaaaagtgatgttctgctgcgacacttggagagccta
catgctcgtgaatctcttgctcggattgttattgatgaagctcattgtgtaagccaatgg
ggacatgattttagaccagactaccagggtcttggtctcttgaaaaggaagtttccaaat
acaccagttttggctttgactgcgactgccactgctagtgtcaaagaagatgtagtgcag
gctcttggtcttgtcaactgcattgtttttcggcaaagtttcaaccggccaaatctatgg
tattctgttattcccaagacaaaaaaatgcgtggaagacatcgataagttcattaaagaa
aatcattttgatgaatgtgggatcatttattgtctctcaagaatggactgtgaaaaagtt
gctgaaaagttacaggaatgcggacataaagcagctttttaccatgggagtatggatcct
gctcaacgtgcttttattcagaagcagtggagcagggatgagattaatatcatatgtgca
actgtggcatttggaatgggtatcaacaaacctgatgttcgctttgtcattcatcattct
cttcctaaatccattgaaggctatcatcaggaatgtggtcgtgctggtagagatggtcag
cgttcatcttgtgtgttgtattacagttacagtgattatatcagagtcaagcatatgatt
actcaaggagccgtggagcaaagtccattgccatctgcatataagcgtacaaatatggat
aattcaggaaggttacgggagacaaatactgaaaatattcgaagaatggtcagttactgt
gaaaatgatgttgattgtcgacgtctgctacaacttattcattttggtgaaaaatttaat
tcttcccactgcaaaagaacatgtgacaattgttccaagaacaaaagcttcattgagaag
gatgtcactgagactgcaaagcaattggttgaagtcgtgaagttaacagggcaacagttc
tcatcatctcatattgtggaagtctacaggggctccttaagccaatttgtcaagaaacac
aaacatgaaacattgaagctgcatggagctggaaaacatctagccaaaggtgaagcctca
cgtatattgcaccatcttgttgttgaggattttcttgtggaggatgtaaagaaaagtgat
ttttatggatctgtatcatctatattaaaggttaatgaatccaaggcttacaacctctgc
gttggtgttcagaaaataacattaagattcccttccgctaatgcatgtaaattgagcaaa
tccgaagcaactccagcaaagggcttactaagacctggaaagcaaagtccttccgaacct
caacatggagttgacgtgaatctgtcagccaaactgtatgctgctctgcgactgcttcgt
actattcttattaaagaaggtggggaaggggtcttggcgcaccacatatttggaaatgct
acattgcacgagatgagcgtgagcattcccagaactaaggaagaacttctcgagattcat
ggcattggaaatgtaaagctaagcaagtatggagatcggtttctggaaaccattgaagct
accatcaaagaacactacaagatggagaaaatcagcagcggtagtaatgacagtttggat
tcaataaagcggagaagagatgcagttagggtttccaaagatggcgatgacttcatggaa
agcacaggacgatcaaagaaaagggcactgaaaaagcaaaacagaagtgtcgaggttgtt
gattttagcgaggcggattattacaacggatctgctaacgttgatctagattttgatgac
actgactttgacattgaaaataacgtgtcagatctgaacgtggaacggaatgcaggagga
agagtgctaccttactggtcagcgcaatga

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