Entry |
|
Name |
(RefSeq) nuclear pore complex protein NUP93A-like
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KO |
K14309 | nuclear pore complex protein Nup93 |
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Organism |
csin Camellia sinensis (tea plant)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csin00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114322300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csin03019]
114322300
Messenger RNA biogenesis [BR:csin03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114322300
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
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AA seq |
863 aa
MANEADMGSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSFNDYMMTVLEEDWQKEKRDFLQSMSRISTLPKTNLGDSSTRGIRPSQIMSLTS
SPQVSSGQSSMELAPLANKPVLEKKAAAYAEVVKNLNNARERSFPFKPATVFKGAYESLG
LDASGGKSVSMQKIWHLIQTLMGEGPTVPRDVSKKMSLVIGARRHLEWGHEKYIIDTIQS
HPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAGDVRRQPPVDTTWQQIYFCLRTGYY
DEAKNVALSSRVSNQFASQLSEWVTTGGMVSPDSAAAASEECEKLLRMGDRVGRPAYDKK
KLLLYAIVSGSRRHIDRLLRENPTLFNTIEDFLWFKLSSIRDCPAGSSSVVLNEGYSPYS
LDDLQIYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAVLHLSKDMGDEGYSIDAVHIA
VVLADHGVLSVSAGAGQKLGVMDAFAEAASIIRQYGSVYLRHGNLSMALEYYAQAAAAVG
GGQLSWSGRGNVDQERQKSLMLKQLLTELLLRDGGIYLLLGPRGAGEEAELGRFLTDVKT
RQQFLLEAARQCQEAGLYDKSIEVQKRVGAFAMALDTINKCLSEAICALSRGRLDGDSRT
AGLIHSGNEVLETCKYYPEVSHQEREQVSEQQTVLSQLEAILSIHKLARAGCHLDALREV
AKLPFLPLDPRAPDIANDAFQNLSAHVQACVPDVLKVALHCLDNLTDSDGSLRALRTKIA
NFLANNLNRNWPRDLYEKVARSL |
NT seq |
2592 nt +upstreamnt +downstreamnt
atggcgaacgaagcagacatgggtagctggaccgatcttctccattcatcttcgaagctt
ctcgaacaagcagctccgtcagctcagttccctcctcttcagaggaacttagatcaattg
gaggcattgtcgaaaaagctaaaggcgaaaaccctaagaactgaagctcctactcaatct
attgctgccacgaggctattagctcgtgaaggaataaatgcagagcagcttgctcgggat
cttaaatcttttgaattaaagacgacttttgaagatgttttccctgctgaggcaacaagc
gtggaagagtatctgcaacaggtacatgagatggcaatggtttcagctattcaggaagct
cagaaggataaccttagaagttttaatgattatatgatgacagttttggaggaggattgg
caaaaggaaaaacgagactttcttcaaagcatgagccgaatttctacattacctaaaacc
aatttgggtgattcaagtaccagggggattcgtccaagtcaaattatgtctttgacttca
agcccacaggtttcatctggtcaatctagcatggagcttgcacctctagctaataagcct
gtccttgagaaaaaagctgcagcctatgctgaagttgttaagaatctcaataatgcaaga
gagcgtagttttccgtttaaacctgctacagttttcaagggtgcttatgagagtttgggc
cttgatgcttctggtgggaaatcagttagcatgcagaagatatggcatctaattcagaca
ctgatgggtgagggcccaactgttccaagggatgtttcgaagaaaatgtctttagtaatt
ggtgcaaggcgccacctcgaatgggggcatgagaaatatatcattgatacaatacaaagt
catcctgcacaggctgctcttggtggggcggttggcaatttgcaaagaatacgtgctttc
cttcggattcgtttaagggattatggggttctagattttgatgcaggggatgttcgtcgg
cagcctcctgttgatacaacatggcagcagatttacttttgcttgcgaactgggtattat
gatgaagcgaaaaatgttgccttatcgtctcgtgtttcaaaccaatttgcttcccagctt
tcagaatgggtaactactggaggaatggtatcaccagattctgcagctgctgcttcagaa
gaatgtgagaagttgttaaggatgggtgatcgagttggtcgacctgcatatgacaagaaa
aagttgctattatatgctatagtatctggttctcgcaggcacattgaccgcctgcttaga
gaaaaccctacacttttcaacaccatagaggatttcttgtggttcaaattgtcttctata
cgagactgtccggcagggtctagttctgttgtcctgaatgaaggatattcaccctacagt
ttggatgatttgcagatttacctaaataaattcgagccttcatattatactaagaacggc
aaggaccctttggtatatccatatgttttgctcttaagcattcagttgctaccagcagtc
ttacatttgtcaaaggatatgggagatgaaggatatagtatagatgctgtgcatatagct
gttgtgctggctgaccatggggtcctttctgttagtgctggagcaggccaaaaactgggg
gtcatggatgcttttgctgaggcagctagcataattaggcagtatggatcagtctattta
cgtcatggcaatctttcaatggcattggaatattatgcacaagctgccgctgcagtgggt
ggtgggcagttgtcatggagcgggagaggtaatgtagatcaggaaaggcagaaaagcttg
atgttgaagcaactacttacagagctgttgttacgggatggtggaatttatcttttactt
ggtccaagaggtgctggagaagaagctgaactgggaaggtttttgactgatgtaaaaact
agacaacagtttctgcttgaagctgctcgccagtgtcaggaagctgggctttatgacaag
tcaatagaagttcagaaaagagttggggcatttgcgatggcattggatacaataaataag
tgcctctctgaagcaatttgtgccttatcacgtggtagattggatggtgatagccggact
gctgggctaattcattctgggaatgaggttttggagacatgcaagtattatccggaagtc
agtcatcaagagagagaacaagtttcggaacaacaaactgtgttaagtcagcttgaggcc
atattgtctatccataaattggcgagagcgggatgtcatttagatgcactgagggaggtt
gcaaaacttccttttcttcctttagatccacgagcgcctgatattgcaaatgatgcgttc
caaaatttgtcagcccatgtccaagcttgtgtgccagacgttttgaaggttgctcttcat
tgcttggacaatctcacagattcagatggatcacttcgtgccttgagaaccaagattgcg
aatttccttgccaacaatttgaataggaactggcctcgtgatctgtatgaaaaggttgct
cgaagcttgtga |