Camellia sinensis (tea plant): 114322583
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Entry
114322583 CDS
T07364
Name
(RefSeq) uncharacterized protein LOC114322583 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114322583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csin03000
]
114322583
03019 Messenger RNA biogenesis [BR:
csin03019
]
114322583
04121 Ubiquitin system [BR:
csin04121
]
114322583
Enzymes [BR:
csin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114322583
Transcription factors [BR:
csin03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114322583
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114322583
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114322583
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114322583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Rtf2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
114322583
NCBI-ProteinID:
XP_028125721
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MVHKPPNHYLGRVLTDATAINKTPSIKKPCLNPVVFDTLYRTSAFGSLSSLSVIERTTVM
MSNEEEKKCPLCAEEMDWTDQQLKPCKCGYEVCVWCWHHIMGMAEKDETEGRCPACRTPY
DKEKIVGMEANCERVVATKKDRKNKAQKTKTKKPEERKDLSSVRVIQRRMAYVIGLPLTL
ADEDRLQRKEYFGQYGKVAKVSLSRTAGGDIQQFVNDTCSVYITYSKEEEAIRCIQSVHG
FVLEGRFLRASFGTAKYCHAWLRNMPCTNPTCLYLHSIGAEEDSFSKDEEAAVHTRNRVH
QIVGDTHNMQRRSGNMLPPPLDDPFNGNSIAADKVLDKIAPKDTAYATETSTGHMTCSYS
SNDRDGRIKTPNKTFVDIVGRSSSGPEKDGNVAEDRKILNLCSDFSSVTIDTDYHLETEY
SNSMLRKVSSRSQLPIGLPRDKDSQEYSLKPFREPSSFTVSGRADFTPSDACIAKGRSCL
MLDSGRQALPGSCSDVREDFLSFDDQRSKGSDTLSQESSVLPSSYPIRISDRSNGRAQQP
KEMCSLSDFNVKCSTVHSHVDEASMPFSCVNSILSDGYNERKFHSSIESDRNFRSSNSFS
NEEIVEHLRRLDNDNITNDDDSSALDAVESSIISNILSLDFDSCDNSSTLSHSLAELFDG
NGGRHGSWNFRNSEKSMFSFAKEENSVNQATDLDSSFSNIGQVSKRCALLPDSMEHEDHY
FCGPQHHVSRAPSLTPPGFSVPSRDPPPGFSAYERTNRVVNPTSGNHLVNTTSLPNSQYC
AHQQEILTTPRVDLIDPAILVVGRGKATDVSNNSGLETWPTSTQPTTYEDQARLWLLMQQ
SASAYQEPKFPPIFMQETTPSTHQQLNFSGRIGDGFSPIGDTFGLSSRFMDQHQTYNPSP
FATQLSSQQKYGNGHVSNGHWPGMDEVRLRNEVGMAEIQRNEMLGFNKFFPGYGDLMLQM
PSTGDVYNRAYGL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggtgcataaaccaccaaatcattatctcggaagggttctcacagacgcgacagccatc
aataaaaccccatccataaaaaagccgtgtctcaatcctgtggttttcgataccctttac
cgtacttccgcgttcggttctctctcctctctctcggtgatcgaacgaactacggtaatg
atgagcaacgaagaagagaagaaatgtcctctatgcgctgaagagatggactggacggat
cagcaattgaagccctgtaaatgtggttatgaggtgtgtgtttggtgctggcatcacata
atgggtatggcagagaaagatgagaccgaggggcgatgtcctgcatgccggacaccttat
gacaaggaaaaaattgtagggatggaagcaaactgtgaaagggtggtggcaacaaagaaa
gatcgaaaaaataaagcacagaagacaaagacgaaaaaacctgaagaaaggaaggaccta
agtagtgttagagtgatccagcggagaatggcttatgtaattgggcttcctcttactctt
gctgatgaagatcgcctacagcggaaggaatattttggtcaatatggaaaagttgcgaag
gtttccctatctcggacagccggtggggatattcagcaatttgttaacgacacttgtagt
gtatatattacatactcaaaggaggaggaggccattcggtgtattcaatcagtacatggt
tttgtcctggaaggtaggtttttaagagcatcgtttggaaccgctaagtattgtcatgca
tggttaagaaacatgccatgcaccaatcctacttgtttatatttacatagcattggtgct
gaagaagatagtttcagtaaagatgaagaagctgcggttcatacaaggaatagagttcac
caaattgtgggtgatacacataatatgcaacggcgctcagggaatatgttgcctcccccg
ctagatgatcccttcaatggcaatagcattgctgctgacaaagttttggacaaaattgcc
ccaaaagacacagcttatgctacagaaacttccaccggccacatgacttgttcatattca
tctaatgatagggatgggcgcattaaaacacctaacaaaacttttgtagatattgtcgga
cgatctagttctggtccagaaaaagatgggaatgttgctgaagatagaaagattttaaac
ttatgctctgacttctcttcagtaacaattgatacagactatcatcttgagactgaatac
tctaattccatgctacgtaaggtttcatctcggagtcagcttcccattggattgcccagg
gataaagattctcaagaatattcactcaaaccatttagagaaccttcaagttttacagtg
tcggggagagctgattttacacccagtgatgcatgtattgcgaaagggcgatcttgtttg
atgttagattcaggaagacaagcattgcctggttcctgcagtgatgtgagagaagatttt
ctgtcttttgatgatcagagatcaaagggctctgacaccttgagtcaagagtcttctgtg
cttccttcatcttatcctattaggatttctgaccgttctaatggtcgtgcgcagcagcct
aaagaaatgtgtagtttaagtgatttcaatgtgaagtgtagcactgtacatagtcatgtt
gatgaggcttctatgccattttcatgtgtaaattcaatattgagtgatggatacaatgag
aggaaattccatagttctattgaatcagataggaattttagatcttctaactcgttctcc
aatgaggaaatagtggaacacttgagaaggcttgacaatgataatattaccaatgatgat
gacagttctgcattagatgcggttgaaagcagtataatatcaaatatcttgtctctggat
tttgattcatgtgacaattcttcgaccttgtctcacagtttagctgaattgtttgatgga
aatggtgggcggcatggttcttggaattttcgtaacagtgaaaaatccatgttctcattt
gcaaaagaagagaattctgtgaatcaagcaactgatttggactcatccttcagtaacatt
ggtcaggtgtctaagcgatgtgctctccttcctgattccatggaacatgaggatcactac
ttctgtgggccgcagcaccacgtgtccagggctccaagtttgactccaccaggattttca
gtgccatccagagacccgcctcctgggttttccgcatatgagagaacaaaccgggttgtt
aatcccacctctgggaatcatttggttaacaccacttccttaccaaacagtcagtattgt
gcccatcagcaggaaatattaacaacaccgcgagttgatctgattgatcctgccatattg
gttgtcggtagaggtaaagcaacagatgtgtcgaacaactcgggcttagaaacgtggcca
acttctactcagcccaccacctatgaagatcaggcaagactttggctcttgatgcaacaa
tctgcatctgcttatcaggaaccaaaatttcctccgatcttcatgcaagaaacgactccg
tctacacatcagcaactgaacttttctggtcgcatcggggatgggttttctcccattggt
gatacttttggcctttcatcgaggttcatggatcaacaccagacctataatccatcccct
tttgctacacaattgtcgtcacagcagaaatatggaaatggacatgtgtcaaatggccat
tggcccggtatggacgaggtccgactcaggaacgaagtaggcatggctgaaattcagaga
aatgagatgttagggttcaacaagttctttcctgggtatggggatttaatgttgcagatg
cccagcacaggcgatgtatacaatagagcgtatgggttgtaa
DBGET
integrated database retrieval system
