Camellia sinensis (tea plant): 114323183
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Entry
114323183 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114323183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114323183
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114323183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Zn_Ribbon_1
DZR
DUF1258
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
114323183
NCBI-ProteinID:
XP_028126514
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSFDLILKASWMSGCGTSKDLYGSNCKHLTLCLSCGKSMAEKHNKCYECGTPITRLIREY
NVRPCSSSDKNYFIGRFVTGLPSFSRKQNAENKWSLQKEALQGRQPTDALREKYKNKPWL
LEDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEK
MKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAGGGKGRRKTSGDDDEANVSDK
GEEDEDEEGARKNRLGLNKRGGDDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA
VGNDPEEREDLAPEIPAPPEIKQDEEDEDETNEEEEGGLSKSGKELKKLLGRTGGLNDSD
VEDDDDDDDIEDDIGSSPVLAPKQKDAPKEEPVDNSPLKPASSGSARGTPTTSKSTKAKR
KINGDDAKASNGAPPKKVKTENEVKSVKEEIVTSSKSSVPTKGPPPSSSKAALTSTASAG
PVTEEEIRAVLMQKTPVTTQDLVAKFKSRLKCKEDKDAFAAILRRISKIQKTNGPSNYVV
LREK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatttgatattgaaggcgtcgtggatgagcggctgtggaacttccaaggat
ctttatggaagcaattgcaagcacttgactctctgtttgtcctgtggaaaatccatggcc
gagaagcataataaatgctacgagtgtggcacccccatcactcgcttgattcgggaatat
aatgtccggccatgttctagcagcgacaagaactacttcattggtcggtttgtgacaggt
ttaccaagtttttcaaggaagcaaaatgctgagaataaatggtctctccagaaagaagca
ttacaaggtcgccaaccaactgacgctttgcgggaaaagtacaagaataagccttggctt
ttggaggatgaaacgggccaatttcagtaccagggtcagcttgagggtgcacaatcagca
acatactacctattaatgctgcaggggaaggagtttgttgctattcctgcaggttcttgg
tacaactttaacaaggttgcacaatataagcaacttacattggaggaagcagaagagaaa
atgaagaatagaaggaaaactgcagatgggtaccaaagatggatgatgaaagcagcaaac
aatggacctgctgcatttggtgaagttgaaaagtttgacgataaggaaagtggagctggt
ggtggaaagggacgtagaaaaactagcggtgatgatgacgaagctaatgtttcagacaag
ggagaggaagatgaagacgaagagggtgcaaggaaaaatagacttggactcaacaaaaga
ggcggtgacgacgatgacgaagaaggtccaagaggaggtgaccttgatttggatgatgat
gatattgagaagggtgatgattgggagcatgaagaaatcttcactgatgatgatgaagct
gtgggtaatgatcctgaggaacgagaagatttagcccctgaaattccggcacctccagaa
attaaacaggatgaagaggatgaggatgaaactaatgaagaagaggagggaggtctgagc
aaatcgggaaaagagttgaagaagctgctggggcgaactggtggtttgaatgattcagat
gtggaggatgatgacgacgatgatgatatagaggatgatattggctcatcacctgtgctg
gctcccaagcagaaggatgctccaaaagaagaacctgttgataacagtcctctaaaacca
gcttcctcgggatctgctcggggaaccccaaccacttccaagtcaacaaaggcaaagaga
aaaataaatggtgatgatgcaaaagctagtaacggtgcacctccaaaaaaagtgaagaca
gaaaatgaggtgaaatctgtgaaagaggaaattgtgactagttcaaaaagtagtgtaccc
acaaaaggtccacctccatcttcttcaaaagcagcattgacatcaaccgcttctgctgga
cctgtcacggaagaagaaattcgagctgttttaatgcaaaagactcctgtgaccacacaa
gatcttgttgctaagtttaaatccagattaaaatgcaaagaggataaggatgctttcgca
gctatactgaggagaatttccaaaatacaaaaaaccaatggacctagtaactatgttgtg
ttgagagagaaatga
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