KEGG   Camellia sinensis (tea plant): 114323183
Entry
114323183         CDS       T07364                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha-like
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    114323183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csin03021]
    114323183
Transcription machinery [BR:csin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     114323183
SSDB
Motif
Pfam: TFIIF_alpha zf-C3HC4_3 Zn_Ribbon_1 DZR DUF1258 Zn_ribbon_3
Other DBs
NCBI-GeneID: 114323183
NCBI-ProteinID: XP_028126514
LinkDB
Position
Unknown
AA seq 544 aa
MSFDLILKASWMSGCGTSKDLYGSNCKHLTLCLSCGKSMAEKHNKCYECGTPITRLIREY
NVRPCSSSDKNYFIGRFVTGLPSFSRKQNAENKWSLQKEALQGRQPTDALREKYKNKPWL
LEDETGQFQYQGQLEGAQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEK
MKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGAGGGKGRRKTSGDDDEANVSDK
GEEDEDEEGARKNRLGLNKRGGDDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA
VGNDPEEREDLAPEIPAPPEIKQDEEDEDETNEEEEGGLSKSGKELKKLLGRTGGLNDSD
VEDDDDDDDIEDDIGSSPVLAPKQKDAPKEEPVDNSPLKPASSGSARGTPTTSKSTKAKR
KINGDDAKASNGAPPKKVKTENEVKSVKEEIVTSSKSSVPTKGPPPSSSKAALTSTASAG
PVTEEEIRAVLMQKTPVTTQDLVAKFKSRLKCKEDKDAFAAILRRISKIQKTNGPSNYVV
LREK
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgtcttttgatttgatattgaaggcgtcgtggatgagcggctgtggaacttccaaggat
ctttatggaagcaattgcaagcacttgactctctgtttgtcctgtggaaaatccatggcc
gagaagcataataaatgctacgagtgtggcacccccatcactcgcttgattcgggaatat
aatgtccggccatgttctagcagcgacaagaactacttcattggtcggtttgtgacaggt
ttaccaagtttttcaaggaagcaaaatgctgagaataaatggtctctccagaaagaagca
ttacaaggtcgccaaccaactgacgctttgcgggaaaagtacaagaataagccttggctt
ttggaggatgaaacgggccaatttcagtaccagggtcagcttgagggtgcacaatcagca
acatactacctattaatgctgcaggggaaggagtttgttgctattcctgcaggttcttgg
tacaactttaacaaggttgcacaatataagcaacttacattggaggaagcagaagagaaa
atgaagaatagaaggaaaactgcagatgggtaccaaagatggatgatgaaagcagcaaac
aatggacctgctgcatttggtgaagttgaaaagtttgacgataaggaaagtggagctggt
ggtggaaagggacgtagaaaaactagcggtgatgatgacgaagctaatgtttcagacaag
ggagaggaagatgaagacgaagagggtgcaaggaaaaatagacttggactcaacaaaaga
ggcggtgacgacgatgacgaagaaggtccaagaggaggtgaccttgatttggatgatgat
gatattgagaagggtgatgattgggagcatgaagaaatcttcactgatgatgatgaagct
gtgggtaatgatcctgaggaacgagaagatttagcccctgaaattccggcacctccagaa
attaaacaggatgaagaggatgaggatgaaactaatgaagaagaggagggaggtctgagc
aaatcgggaaaagagttgaagaagctgctggggcgaactggtggtttgaatgattcagat
gtggaggatgatgacgacgatgatgatatagaggatgatattggctcatcacctgtgctg
gctcccaagcagaaggatgctccaaaagaagaacctgttgataacagtcctctaaaacca
gcttcctcgggatctgctcggggaaccccaaccacttccaagtcaacaaaggcaaagaga
aaaataaatggtgatgatgcaaaagctagtaacggtgcacctccaaaaaaagtgaagaca
gaaaatgaggtgaaatctgtgaaagaggaaattgtgactagttcaaaaagtagtgtaccc
acaaaaggtccacctccatcttcttcaaaagcagcattgacatcaaccgcttctgctgga
cctgtcacggaagaagaaattcgagctgttttaatgcaaaagactcctgtgaccacacaa
gatcttgttgctaagtttaaatccagattaaaatgcaaagaggataaggatgctttcgca
gctatactgaggagaatttccaaaatacaaaaaaccaatggacctagtaactatgttgtg
ttgagagagaaatga

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