Camellia sinensis (tea plant): 114323274
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Entry
114323274 CDS
T07364
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114323274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114323274
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114323274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
114323274
NCBI-ProteinID:
XP_028126640
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MDSKSSRKARDERERDRDSIDEYRDSSKSHRDRDHKQRSSKLKSRDADDDHHHHHSHSAE
KHRSKHEKHRDRGGDDHHRSRNEKDDSRRSREYSQDRERSHEPRNERESSRDRAHDHRDR
REKSYEPRSERERERSRDRASSHEREGSRDRALREESVERRHSSTSQKRKERGDSEDRVD
GSEKKARVSEERKEKKERRRFGDKAEDVAKELNGGERGEREERRERRRFDDGVKDDEARD
SNAISRGEKRDRRKFEDRVKKEDADVNVDEDFDEKIVKKQPKYESFDIDQNHQIAAAPNR
SDAIDNVMASRTLAEASLAPSHSPPTKVSLISTPNENKGVSIPGSHEVHGKSSTDGTAPA
SKSGNLSLDVLAKAKRVLQMQKELKENMKKLPLSNKVANSEGMLNVASKEGLKAPSSSSG
LLPTPVSASTLPSAAAASLQPSASGTVPQAGLTAPNFEAVKRAQELAAKMGFRQDPQFAP
LINMFPGQMPPEVTFQSKPAKAPVLRLDALGREIDEHGNVVSTTKVTNLSTLKVNINKQK
KDAFQILKPELDVDPEKNPHFDARMGIDSKKLLRPKRMSFQFVEEGKWSKDAEIIKLKSQ
FGEAQAKELKAKQAQLAKAKAEPDINPNLIEVSERVIIKEKPKELIPEIEWWDQPLLHSG
TYGDITDGNIAEDKLRMENITIYVQHPRPIEPPAEPAAPPPQPLKLTKKEQKKLRKQRRL
AREMDRQEMIRQGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIRSAAAEREQAHIDR
NIARKLTPDERREKKERKLFDDPSTLETIVSVYKINDLSHPQTRFKVDVNAQENRLMGCA
VISDSISVVVVEGGNKSIKRYGKLMLKRIDWASAVKIEDEDGDEDEEKPVNKCMLVWQGS
VAKPSFNRFSVHECRTEAAARKIFSDAGVGHYWDLSVNFTEDQM
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaatcgagccgaaaagccagagatgaacgcgagagagatagagattcaatc
gatgaatacagagattcaagcaaaagccacagagatcgagaccacaagcagcgaagcagc
aaactaaaatccagagatgccgatgacgatcaccaccaccaccactcccactccgccgag
aagcaccgctccaagcacgaaaaacatcgagaccgaggcggcgatgatcatcacagatcg
agaaacgagaaggacgatagccggagatccagagagtactctcaagaccgcgagagatcg
cacgagccaaggaatgagagggaaagtagcagagatagggctcatgatcatcgcgacagg
cgtgagaaatcgtatgagccgaggagtgagcgagagcgagagcgaagcagagacagggcg
agttcgcatgagagagagggaagtagagatagggctttgagagaggagtcagtggagagg
cggcattcgtcgacatcgcagaagaggaaggagagaggagacagcgaagatcgtgtcgat
ggaagcgagaagaaagctagggtttcggaggagaggaaagagaagaaggagaggaggcgg
tttggagataaggctgaggacgttgctaaggaattgaacggaggagagaggggagagagg
gaagagaggagagagaggaggagatttgacgatggagtcaaggatgatgaggcaagagac
agcaatgcgatttctaggggagagaagagagataggaggaagtttgaggatcgagtgaag
aaagaagatgcagatgttaatgttgatgaggattttgatgagaaaatagtgaagaaacaa
ccaaagtatgagtcgtttgatattgatcagaatcatcagattgctgctgccccaaaccgg
agtgatgcaatagacaatgttatggcatctaggactctagcggaggcatctttggcccct
agccattcccctcctaccaaggtatctttgatttctaccccaaatgaaaataagggagtt
agtattcccgggtctcatgaggttcatggaaaatctagtacagatgggacagctccagct
agcaaaagtggaaatctctctcttgatgttttagcaaaagccaagagagttttacaaatg
caaaaggagctaaaagagaatatgaagaaacttccactgtcaaataaggttgcaaattca
gaaggtatgctgaatgtagcgtcaaaggagggtcttaaagccccatcctctagttctgga
ttacttcctacacctgtgagtgcatccactttaccttctgctgctgcagcttctttgcag
ccttctgcaagtgggacggttcctcaagctgggcttacagcacccaattttgaagctgtg
aaacgtgcacaagagcttgctgccaagatgggatttcggcaagatccacagtttgctcct
cttataaacatgtttccaggacagatgccaccagaggttaccttccaatcaaagcctgcc
aaggcccctgttcttcgtttggatgcgctaggtagggaaatagatgagcatggaaatgtg
gtgagcacaactaaagtaaccaacctgagcacccttaaggtgaacattaacaagcaaaag
aaagatgcatttcaaattcttaaacctgaattggatgtagacccagaaaaaaatccccat
tttgatgcaagaatgggtattgattcaaaaaagcttttgaggcctaagaggatgagtttt
cagtttgtagaggaaggcaaatggtcaaaagatgcggagattattaaactgaagagtcaa
tttggagaagcacaagccaaagagctgaaggcaaagcaggctcaactggcgaaggcaaaa
gcagagcctgatataaatccaaacctgatagaggtatcagagagagtaataatcaaagaa
aaaccgaaggaactgattcctgaaatcgagtggtgggatcaacctcttttgcattctggt
acttatggcgacatcactgatggtaacatagctgaagataaactgaggatggagaacata
actatctatgtgcaacaccctcgtcctattgagccccctgccgaaccagcggcaccacca
cctcaacccctgaaactaaccaagaaggagcagaagaaactccgaaaacagcggcgtctg
gctagggaaatggataggcaggagatgattcggcaaggcttgttagaacccccaaaaccg
aaagttaaaatgagcaatctcatgaaggttcttggctccgaagcaactcaagatcccacc
aggcttgaaatggaaatccggagtgcagctgccgagcgtgaacaagctcacatcgatagg
aacattgcacgcaagctcactcctgatgaacgtcgtgaaaagaaagagaggaagcttttt
gatgacccgagcactcttgagactatagtttcagtatacaagatcaatgacctttcacac
ccacagacccgcttcaaggttgatgttaatgcccaggagaaccggttgatgggttgtgct
gtaatttctgacagcataagcgttgtggttgttgaaggtgggaacaaatccattaaaagg
tatggaaagcttatgctgaagcgtatagactgggcttctgctgtgaaaattgaggatgaa
gatggtgatgaagatgaggaaaaacccgtcaacaagtgcatgttagtctggcaagggagc
gttgctaagcccagcttcaataggttttctgttcacgagtgcaggactgaagcagctgcc
cgtaaaatcttttctgatgctggggttggtcactattgggatctttctgttaacttcact
gaggaccaaatgtaa
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