Camellia sinensis (tea plant): 114323287
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Entry
114323287 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114323287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114323287
03041 Spliceosome [BR:
csin03041
]
114323287
03036 Chromosome and associated proteins [BR:
csin03036
]
114323287
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114323287
Spliceosome [BR:
csin03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114323287
Complex B
114323287
Complex C
U2 SnRNP specific factors
114323287
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
114323287
TFTC complex
114323287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
114323287
NCBI-ProteinID:
XP_028126654
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLDLLRPDENGKIQTILSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIFYSICGVDCGFDNPI
FASIELDYSEADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRYDLPAHFGVLIVSAAMHKQKSMFFFLLQ
TEYGDIFKVTLDHDNDRVTELRIKYFDTIPVTASLCVLKSGFLFAASEFGNHALYQFQAI
GDEPDVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKIINLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKQEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIIRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVLQPKRKLLVIIESDQGAYAAEQRENAKKECFEDAGMGENGKVEQMENGGDDEDKED
PLSDEQYGYPKVESDRWVSCIRVLDPRTANTTCLLELQDNEAAFSICLVNFHDKEYGTLL
AVGTAKGLQFWPKRSISSGYIHIYRFVEDGKSLELLHKTQVDDVPLALCQFQGKLLAGVG
SVLRLYDLGKRKLLRKCENKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIF
ADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLAQDVSDEIEEDPTGGKIKWEQGKLNG
APNKVEEIVQFHVGDVVTCLQKASLIPSGGECVIYGTVMGSLGALLAFTSRDDVDFFSHL
EMHMRQENPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPGEI
LKKLEEVRNKIV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcactctgcaacaagccactggcatagtttgcgctatcaatgga
aacttctcaggtggaaaatctcaagaaatcgcagtcgcgagaggcaaagtcctcgatctt
cttcgacccgacgagaacggtaagatccaaactattctctctgttgaaattttcggtgct
attaggtctttagctcagtttaggttaactggttcccaaaaagactacattgtagtcggt
tccgactcgggtcgaatcgtgattcttgaatacaacaaagaaaagaatgtgtttgataaa
gttcatcaagaaacatttgggaaatcgggttgtcgccggattgttccagggcagtacttg
gcgattgacccgaaaggccgtgccgtgatgattggggcttgtgagaaacaaaaacttgta
tatgttttgaatagggatactgcggctaggctgacgatttcttcaccgttggaggcgcac
aaatcgcatactattttttattcgatttgtggggttgattgcgggttcgataacccgata
tttgcatcgattgaattggattattcggaggctgatcaggattcgactgggcaggcggct
gctgaggcacaaaaacatttgactttttatgagcttgatttagggcttaatcatgtgtct
aggaagtggtctgaacaggttgataatggtgctaacatgcttgtgactgttccgggtggt
ggggatgggccgagtggagtgcttgtgtgtgctgaaaattttgtgatatataagaatcag
ggtcatcctgatgtccgtgctgtcattcctaggcgatatgatttacctgcccactttggg
gttcttatagtttcggctgctatgcacaagcaaaagtctatgttcttctttcttttgcaa
acggagtatggagacatcttcaaggttacgttggatcatgataatgaccgtgtgacggag
ttgaggattaagtactttgatacaattcctgtaacggcgtcattgtgtgtcttgaaatca
gggtttttgtttgctgcttcagagtttgggaatcatgctttgtatcagtttcaggcaata
ggggatgagcctgatgtggagtcttcgtcagctacgttaatggaaactgaagaaggtttc
cagcctgtatttttccagcctagaagacttaagaatcttgtaaggattgaccaagttgag
agtttgatgccaattatggacatgaaaatcataaatctatttgaggaagaaactcctcag
atttttacactttgtgggaggggtcctcgatcatctctaaggatactgagaccaggtttg
gctattagtgaaatggctgtgtcgcagcttcctggtgtcccaagtgctgtctggactgtg
aagaagaacgtcaatgacgagtttgatgcttatattgttgtttcttttgcaaatgcaact
ctcgtcctttccattggtgagacagttgaagaagtcagtgatagtggattccttgatact
accccctcacttgctgtttctttgataggtgatgattctctgatgcaggttcatcctagt
ggtattaggcatattagggaagatgggcgtattaatgagtggagaactcctggaaaaagg
acaattgttaaggttgggtctaacagacttcaagtggttattgcgctgagtggaggggag
attatatattttgaggtggatatgactggccagctgatggaggttgagaagcaagaaatg
tctggggatgtggcttgtttggacattgcccctgttcctgaaggacgacagaggtcccgt
ttccttgcagttggatcatatgacaactgcattcgtatattgtctttggatcctgatgac
tgtatgcaggtcttaagtctgcaaagtgtgtcttctcctccagagtctctcctctttctt
gaagttcaggcttctgttggtggggaggatggtgcagatcaccctgctagcctttttctc
aatgctggtttacagaatggggttttgttcagaacggtggtggacatggtgacaggtcag
ctttcggatgcccgttcccgattcttaggactgagagccccaaagctcttttctgtcatc
ataaggggacggcgtgctatgctttgcttgtcaagtagaccctggcttggttacatacac
caaggtcatttccttttgacacccctttcatatgagactcttgaatttgctgcttcattt
tcatctgatcagtgtgctgaaggtgtagttgctgtcgctggggatgcattacgggtgttt
actattgagagattgggggagacttttaatgaaactgcaattcctttgaggtacacccca
agaaaatttgtgcttcaaccaaaacggaaactgttggtaattattgagagtgaccaagga
gcatatgcagccgaacagcgtgagaatgcaaaaaaggaatgctttgaagatgctggaatg
ggggagaatggaaaggtggaacagatggaaaatggtggtgatgatgaagataaggaagat
cccctctctgatgagcagtatggttatccgaaggtagagtcggacaggtgggtttcttgc
atcagagttcttgatccaagaacagcaaacactacttgtttgctggagcttcaggataat
gaggctgcattcagcatttgcttggtaaatttccatgataaggagtatggaactctttta
gctgttggtacggcgaagggcctgcaattctggcccaaaagatctatttcttctggatat
atccatatttataggtttgtggaagatgggaaatcccttgaacttctgcacaagacacaa
gtggatgatgttccccttgctttgtgccagttccaaggaaaattactcgctggagttgga
tctgtgctcagattatacgatttgggtaaaaggaagttgcttagaaagtgtgagaataag
ttgttccccaacacaatcacatctatccatacctaccgtgatcgtatttacgtaggtgac
attcaggagtcattccattattgcaagtatagacgtgatgaaaatcagttatatatattt
gctgatgattgtgttccaagatggcttactgcatcgtaccacatagattttgacaccatg
gctggtgcagacaagtttgggaatatctattttgtgcggttagcacaggatgtgtcagat
gaaattgaagaagatccaactggggggaagataaagtgggagcaagggaagctgaatgga
gcccctaacaaggtagaggaaatagtgcagtttcatgttggtgatgtggtcacatgcttg
caaaaggcatctctaattccgagtggtggagagtgtgtcatttatgggactgtgatggga
agtttgggtgcattgcttgctttcacttcccgtgacgatgttgacttcttttctcatcta
gagatgcatatgaggcaggaaaacccgcctttgtgtggaagagatcacatggcctataga
tcagcctattttccagttaaggatgtgattgatggagatttgtgtgagcaattcccaaca
ttgcctatggatatgcagcggaaaattgctgatgaattggatagaactccgggggagatt
ctgaagaaacttgaagaagttcgaaataagattgtttga
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integrated database retrieval system
