Camellia sinensis (tea plant): 114323909
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Entry
114323909 CDS
T07364
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114323909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114323909
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114323909
mRNA cycle factors
Common to processing body (P body) and stress granule
114323909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
114323909
NCBI-ProteinID:
XP_028127386
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MTIPMDNTLDLSTRERVQRLYTKNVELENKRRKAAHARIPSDPNAWQQMRENYEAIVLED
HAFSEQHEIEYALWQLHYRRIEELRAHLSAALASAGSATSQNGKGATRPGPDRIAKIRTQ
FKTFLSEATGFYHDLMVKIRSKYGLPLGYFSDDQQNQILSQDGNISAEVMKGLVSCHRCL
IYLGDLGRYKGLYGEGESKARDFAAASSYYMQASSLWPSSGNPHHQLAILASYSGDELLT
IYRYFRSLAVDNPFSTARDNLIIAFEKNRQNYSQLFGDAKASVKMPPARMTGKGRGKGKG
ETRVPKDDRVEASLVKEKASLPEIFKAFSICFVRLNGILFTRTSLETFGELFSMARSDLL
ELLACGPDEEYNFGSDAAECRLVIIRLIAILIFTVHNANKEIENQSYAEILQRSVLLQNA
FTAIFEFMGHIILRCIQLNDPSTSYMLPGIMVFVEWLACRQDIAVGTEVEEKQASARSFF
WDNYVSFLNKLLSSGFSSINENEDETCFFNMSRYDECETANRLALFEDFELRGFLPLLPA
QLILDFSRKHSFESDGGNKGKKARVQRIIAAAKALSNVVRVGKQGIYFDPKLKRFAIGVE
PQMSDDYLLCSSLEIPRLNGTMQENPAESQVNLGLLQPKPQLYMEGEEEDEEIVFKPTVS
EKHTDAASKPSSFEVLGSVVNCSKADCAKADSGNNVGFVSASNDGFLLPNAFNTSSRPPT
SLANITAQYLQPIQPNTSMWLAQEQVSIANELTNLSLLENGFPMKHGLQDHLGALQPIAL
PVPFPHQYVNLSAGNKYPVQVSETAVPSKFDSIMSSGTVLDSLSMKPLSMMPAGLRKNPV
SRPIRHSGPPPGFNSVPPKLVDESLSGVRLKNENPPIDDYSWLDGYQLPSSTQGIGFSNT
INQSAEAYPVSKINSSMGMVGFPFPGKQVSTLQVHGEKQNGWQDYQFSERLKLYQEQEQQ
FQKGNQQSITLPEQYQESSVDFFAIQVVNSLLWLMSSDLVLPVQSSPLQSQCYFLLEYGW
SWIVAGTC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaccattccgatggataatactttagatctttcaacaagagagcgtgttcaacgtctt
tacaccaagaatgttgaattggagaataagcgtcggaaagcagcacatgccaggattccc
tcagatcccaatgcatggcaacagatgcgagagaactatgaagctattgttcttgaagat
cacgctttctctgaacagcatgaaatagagtatgctttgtggcaattgcattataggaga
attgaggagttgcgtgcacaccttagtgctgctcttgcatcagcaggatcggccacgtct
caaaatgggaaaggtgccacacgtcctggacctgatcgaatcgcaaaaattcgtacccaa
tttaaaaccttcctttcggaagcaactgggttttatcatgatttgatggtaaaaattaga
tctaaatatggtctaccattaggttatttctctgatgatcaacaaaatcagattttgtcc
caagatggaaatatatctgctgaagtcatgaaaggcttggtatcttgccaccgttgtttg
atttaccttggggatcttggtcgttacaaagggttatatggagagggtgagtccaaagct
agagattttgcagcagcatcaagctactatatgcaagcttcttcactttggccttcaagt
ggcaaccctcatcatcagcttgcaatactggcttcatattcaggggatgaattattgacc
atttacagatatttccgaagtttggcggttgataaccctttttcgacagcaagggataat
ttgatcattgcatttgagaagaaccgtcagaattattctcagctgtttggggatgccaaa
gcttctgttaagatgccccctgcacggatgactggaaaagggagaggaaaagggaaaggt
gaaacaagggttccaaaagatgatagggtggaagctagtcttgtcaaggaaaaagcatct
ttacctgagatttttaaagccttcagcatttgttttgtccgacttaatggtattcttttc
acacggacaagcttggagacatttggggaacttttctctatggctagaagtgatttgctg
gagcttcttgcttgcggtccagatgaggagtacaattttggttcagatgctgctgaatgt
agacttgtgattatcagactgatagccatcctcatattcactgttcacaatgcaaataaa
gaaattgaaaatcagtcatatgctgaaattttacaacgttcagttctgcttcagaatgca
tttactgctatttttgagtttatggggcatataattctcagatgcatccagttgaatgat
ccttcaacaagctatatgttgcctggcataatggtttttgtggaatggttagcttgtcgg
caagatattgcagttggcactgaagtggaggagaaacaagctagtgctagatcatttttt
tgggataactatgtttcctttttgaacaagcttttgtcaagtggattctcatctattaat
gagaatgaagatgaaacatgtttcttcaatatgagcaggtatgatgaatgtgaaactgcc
aatcggcttgcattgtttgaagactttgaattgagaggattcctgcctctgctccctgca
caactaatccttgatttttcgaggaaacattcatttgaaagtgatggtggcaataaaggg
aagaaagctcgtgttcagaggattatagctgctgcaaaggctctttctaatgtggttcgt
gttgggaaacagggaatttattttgatccaaagttgaagagatttgctataggtgttgaa
ccacaaatgtcagatgattatttgctttgtagctccttagagatacccagattaaatggt
accatgcaagaaaatccagcagaaagtcaagtgaatcttggacttttgcagccaaagcca
cagttatacatggaaggggaagaagaggatgaggagattgttttcaaaccaactgtgtct
gagaagcatactgatgctgcttcaaaaccaagctcttttgaggttttggggtctgttgtt
aattgctccaaggctgattgcgccaaggctgattcgggaaataacgttgggtttgtttca
gcctctaatgatggtttccttttgccaaatgcttttaatacaagttcaaggccacctaca
tctcttgctaatattactgctcagtatttgcaaccaatccagccaaatacttcaatgtgg
ctggcacaagaacaggtttctattgcaaatgaactgaccaatttgagcttattggagaat
gggtttcctatgaaacatggtttgcaagatcatttgggagctttgcagcctattgcgctt
ccagttccatttcctcatcagtatgtgaatctcagtgctggaaacaaatatccagttcag
gtctctgaaactgcagtgccttctaagttcgattcgattatgtcatcgggaactgttttg
gatagtttgtccatgaagccattgtcaatgatgcctgcaggtttgagaaagaatccagtg
agccgacccatcaggcattcgggtcctccacctggatttaactctgttcctcccaaactt
gttgatgagtccttgtctggtgtaagactgaagaatgaaaatccaccaatcgatgattat
agctggctagatggatatcaattgccgtcatcaacccaaggcattggattcagtaatacc
ataaatcagtcagcagaggcatatcctgtgagtaagatcaatagctcgatggggatggta
ggctttccctttcctggaaaacaagtgtcgacactgcaagtccatggagaaaaacagaat
ggctggcaggactatcagttttctgaacgtctgaaactatatcaggaacaggaacagcaa
tttcagaaaggaaatcaacagtctattacattgccagagcagtatcaagaatctagtgtt
gatttttttgccattcaggttgtgaacagtttactgtggttgatgtccagtgacctggtg
ctaccagttcagagttcgcctttgcagagccaatgttattttctgttggaatatggatgg
tcttggattgttgcaggcacttgctga
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integrated database retrieval system