KEGG   Camellia sinensis (tea plant): 114323909
Entry
114323909         CDS       T07364                                 
Name
(RefSeq) protein SMG7-like isoform X1
  KO
K14409  protein SMG7
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114323909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114323909
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     114323909
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114323909
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 114323909
NCBI-ProteinID: XP_028127386
LinkDB
Position
Unknown
AA seq 1028 aa
MTIPMDNTLDLSTRERVQRLYTKNVELENKRRKAAHARIPSDPNAWQQMRENYEAIVLED
HAFSEQHEIEYALWQLHYRRIEELRAHLSAALASAGSATSQNGKGATRPGPDRIAKIRTQ
FKTFLSEATGFYHDLMVKIRSKYGLPLGYFSDDQQNQILSQDGNISAEVMKGLVSCHRCL
IYLGDLGRYKGLYGEGESKARDFAAASSYYMQASSLWPSSGNPHHQLAILASYSGDELLT
IYRYFRSLAVDNPFSTARDNLIIAFEKNRQNYSQLFGDAKASVKMPPARMTGKGRGKGKG
ETRVPKDDRVEASLVKEKASLPEIFKAFSICFVRLNGILFTRTSLETFGELFSMARSDLL
ELLACGPDEEYNFGSDAAECRLVIIRLIAILIFTVHNANKEIENQSYAEILQRSVLLQNA
FTAIFEFMGHIILRCIQLNDPSTSYMLPGIMVFVEWLACRQDIAVGTEVEEKQASARSFF
WDNYVSFLNKLLSSGFSSINENEDETCFFNMSRYDECETANRLALFEDFELRGFLPLLPA
QLILDFSRKHSFESDGGNKGKKARVQRIIAAAKALSNVVRVGKQGIYFDPKLKRFAIGVE
PQMSDDYLLCSSLEIPRLNGTMQENPAESQVNLGLLQPKPQLYMEGEEEDEEIVFKPTVS
EKHTDAASKPSSFEVLGSVVNCSKADCAKADSGNNVGFVSASNDGFLLPNAFNTSSRPPT
SLANITAQYLQPIQPNTSMWLAQEQVSIANELTNLSLLENGFPMKHGLQDHLGALQPIAL
PVPFPHQYVNLSAGNKYPVQVSETAVPSKFDSIMSSGTVLDSLSMKPLSMMPAGLRKNPV
SRPIRHSGPPPGFNSVPPKLVDESLSGVRLKNENPPIDDYSWLDGYQLPSSTQGIGFSNT
INQSAEAYPVSKINSSMGMVGFPFPGKQVSTLQVHGEKQNGWQDYQFSERLKLYQEQEQQ
FQKGNQQSITLPEQYQESSVDFFAIQVVNSLLWLMSSDLVLPVQSSPLQSQCYFLLEYGW
SWIVAGTC
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaccattccgatggataatactttagatctttcaacaagagagcgtgttcaacgtctt
tacaccaagaatgttgaattggagaataagcgtcggaaagcagcacatgccaggattccc
tcagatcccaatgcatggcaacagatgcgagagaactatgaagctattgttcttgaagat
cacgctttctctgaacagcatgaaatagagtatgctttgtggcaattgcattataggaga
attgaggagttgcgtgcacaccttagtgctgctcttgcatcagcaggatcggccacgtct
caaaatgggaaaggtgccacacgtcctggacctgatcgaatcgcaaaaattcgtacccaa
tttaaaaccttcctttcggaagcaactgggttttatcatgatttgatggtaaaaattaga
tctaaatatggtctaccattaggttatttctctgatgatcaacaaaatcagattttgtcc
caagatggaaatatatctgctgaagtcatgaaaggcttggtatcttgccaccgttgtttg
atttaccttggggatcttggtcgttacaaagggttatatggagagggtgagtccaaagct
agagattttgcagcagcatcaagctactatatgcaagcttcttcactttggccttcaagt
ggcaaccctcatcatcagcttgcaatactggcttcatattcaggggatgaattattgacc
atttacagatatttccgaagtttggcggttgataaccctttttcgacagcaagggataat
ttgatcattgcatttgagaagaaccgtcagaattattctcagctgtttggggatgccaaa
gcttctgttaagatgccccctgcacggatgactggaaaagggagaggaaaagggaaaggt
gaaacaagggttccaaaagatgatagggtggaagctagtcttgtcaaggaaaaagcatct
ttacctgagatttttaaagccttcagcatttgttttgtccgacttaatggtattcttttc
acacggacaagcttggagacatttggggaacttttctctatggctagaagtgatttgctg
gagcttcttgcttgcggtccagatgaggagtacaattttggttcagatgctgctgaatgt
agacttgtgattatcagactgatagccatcctcatattcactgttcacaatgcaaataaa
gaaattgaaaatcagtcatatgctgaaattttacaacgttcagttctgcttcagaatgca
tttactgctatttttgagtttatggggcatataattctcagatgcatccagttgaatgat
ccttcaacaagctatatgttgcctggcataatggtttttgtggaatggttagcttgtcgg
caagatattgcagttggcactgaagtggaggagaaacaagctagtgctagatcatttttt
tgggataactatgtttcctttttgaacaagcttttgtcaagtggattctcatctattaat
gagaatgaagatgaaacatgtttcttcaatatgagcaggtatgatgaatgtgaaactgcc
aatcggcttgcattgtttgaagactttgaattgagaggattcctgcctctgctccctgca
caactaatccttgatttttcgaggaaacattcatttgaaagtgatggtggcaataaaggg
aagaaagctcgtgttcagaggattatagctgctgcaaaggctctttctaatgtggttcgt
gttgggaaacagggaatttattttgatccaaagttgaagagatttgctataggtgttgaa
ccacaaatgtcagatgattatttgctttgtagctccttagagatacccagattaaatggt
accatgcaagaaaatccagcagaaagtcaagtgaatcttggacttttgcagccaaagcca
cagttatacatggaaggggaagaagaggatgaggagattgttttcaaaccaactgtgtct
gagaagcatactgatgctgcttcaaaaccaagctcttttgaggttttggggtctgttgtt
aattgctccaaggctgattgcgccaaggctgattcgggaaataacgttgggtttgtttca
gcctctaatgatggtttccttttgccaaatgcttttaatacaagttcaaggccacctaca
tctcttgctaatattactgctcagtatttgcaaccaatccagccaaatacttcaatgtgg
ctggcacaagaacaggtttctattgcaaatgaactgaccaatttgagcttattggagaat
gggtttcctatgaaacatggtttgcaagatcatttgggagctttgcagcctattgcgctt
ccagttccatttcctcatcagtatgtgaatctcagtgctggaaacaaatatccagttcag
gtctctgaaactgcagtgccttctaagttcgattcgattatgtcatcgggaactgttttg
gatagtttgtccatgaagccattgtcaatgatgcctgcaggtttgagaaagaatccagtg
agccgacccatcaggcattcgggtcctccacctggatttaactctgttcctcccaaactt
gttgatgagtccttgtctggtgtaagactgaagaatgaaaatccaccaatcgatgattat
agctggctagatggatatcaattgccgtcatcaacccaaggcattggattcagtaatacc
ataaatcagtcagcagaggcatatcctgtgagtaagatcaatagctcgatggggatggta
ggctttccctttcctggaaaacaagtgtcgacactgcaagtccatggagaaaaacagaat
ggctggcaggactatcagttttctgaacgtctgaaactatatcaggaacaggaacagcaa
tttcagaaaggaaatcaacagtctattacattgccagagcagtatcaagaatctagtgtt
gatttttttgccattcaggttgtgaacagtttactgtggttgatgtccagtgacctggtg
ctaccagttcagagttcgcctttgcagagccaatgttattttctgttggaatatggatgg
tcttggattgttgcaggcacttgctga

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