Camellia sinensis (tea plant): 14412399 Help Entry 14412399          CDS       T07364                                  Symbol rpoC2, CSC0178 Name (RefSeq) RNA polymerase beta'' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism csin  Camellia sinensis (tea plant) Pathway csin03020   RNA polymerase Brite KEGG Orthology (KO) [BR:csin00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     14412399 (rpoC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csin03021]     14412399 (rpoC2)    03400 DNA repair and recombination proteins [BR:csin03400]     14412399 (rpoC2) Enzymes [BR:csin01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      14412399 (rpoC2) Transcription machinery [BR:csin03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      14412399 (rpoC2) DNA repair and recombination proteins [BR:csin03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       14412399 (rpoC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 Peptidase_M23 Motif Other DBs NCBI-GeneID:  14412399 NCBI-ProteinID:  YP_007317238 UniProt:  L0E787 LinkDB All DBs AA seq 1378 aa AA seqDB search MEVLMAERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN PNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMIP ERIFIQTLIGRVLADDIYMGPRCIATRNQDIGIGLINRFITFRAQPISIRTPFTCRSISW ICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPS NGKIKFNENLVHPTRTRHGHPAFLCSIDLYVTIESEDIIHNVNIPSKSFLLVQNDQYVES EQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNIHLLPKTSHLWI LSGRAVQIQSSSLFAPQGPRSNERSFSFCQRIYISNPSLTNDQVRHKFFSSDFSGKKKDR IPDYSELNRIVCTGHYNLIYPSILHDNSDLLAKRRRNRFIIPLHSIQEREKELMPPSGIS IEIPINGIFRRKSILAYFDDPRYRRKGSGITKYGTIDVHSFVKKEDLIEYRGVKEFRPKY QMKVDRFFFIPEEVHLLPGSSSIMVRNNSIIGIDTQITLNTRSRVGGLVRVERKKKRIEL KIFSGDLHFPGETDKISRHSGILIPPGIGKKNSKASKNWIYVQRITPTKKKYFVLVRPVV TYEITDGINLATLFPPDLLQERDNVQLQVVNYILYGNGKPIRGISNTSIQLVRTCLVLNW DQEKKSSSIEEARASFVEIRTNGLIRDFLRIDLVKSSISYTGKRKDPSSSGLISDNGSDR TNINPFSSTFFYSKAKIQQSLNQNQGTIHTLLNRNKECQSLIILSSSNCSRMGPFNDVKS SNVIKESIKKNPPMPIRNSLGPLGIAFKIANFYLFYYLITYNQILVTNYLQLDNLKQIFQ VIKYYLMDENGKIYNPDPCSNIILNPFNLNWYFLHPNYCEKTSTKMSLGQFICENVCIVK NGPHLKSGQVLIVQVDSVVIRSTKPYLATPGATVHGHYGEIFYEGDTLVTFIYEKSRSGD ITQGLPKVEQVLEVRSIDSISMNLENRVEGWNERITRILGIPWVFLIGAELTIVQSRISL VNKIQKVYRSQGVQIHNRHIEIIVRQITAKVLVSEDGMSNVFSPGELIGLLRVERMGRAL EEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGM IPVGTGFKGLMPPSRQHNNIPLETKNKNLFEGEMRDILFHHRKLFDSCLSKNFHDTSE NT seq 4137 nt NT seq  +upstreamnt  +downstreamnt atggaggtacttatggcagaacgggccaatctggtctttcacaataaggcgatagacgga actgccatgaaacgatttattagtcgattaatagatcacttcggaatggcatatacatca cacatcctggatcaagtaaagactttgggtttccagcaagccactgctacatccatttca ttaggaattgatgatcttttaacaataccttcgaaaggatggctagttcaagatgctgaa caacaaagtttgattttggaaaaacaccaccattatgggaatgtacacgcggtagaaaaa ttacgtcaatccattgagatatggtatgctacaagtgaatatttgcgacaagaaatgaat cctaattttaggatgactgacccttttaatccagtccatataatgtctttttcgggagct agaggaaatgcatctcaggtacatcaattagtaggtatgagaggattaatgtcggatccc caaggacaaatgattgatttacctattcaaagcaatttacgcgaaggactctctttaaca gaatatatcatttcttgctacggagcccgcaaaggggttgtggatactgctgtacgaaca tcagatgctggatatctcacgcgcagacttgttgaagtagttcaacacattgttgtacgt cgaacagattgtggcaccgtccgaggtatttctgtgagtcctcgaaatgggatgataccg gaaagaatttttatccaaacattaattggtcgtgtattagcggatgatatatatatgggt ccacgatgcattgccactcgaaatcaagatattgggattggacttatcaatcgattcata acctttcgagcacaaccaatatctattcgaactccctttacttgtaggagtatatcttgg atctgtcgattatgttatggccggagtcctactcatggtgacctggtcgaattgggagaa gctgtaggtattattgcgggtcaatctattggagaacccggtactcaattaacattaaga acttttcataccggcggagtattcacagggggtactgcagaacatgtacgagccccttct aatggaaaaataaaatttaatgaaaatttggttcatccgacacgtacacgtcatgggcat cctgcttttctatgttctatagatttgtatgtaactattgagagtgaagatattatacat aatgtgaatattccatcgaaaagttttcttttagttcaaaatgatcaatatgtagaatca gaacaagtgattgctgagattcgcgcgggaacatccacttttaattttaaagagagagtt cgaaaacatatttattctgactcagagggagaaatgcactggagtaccgatgtgtatcat gcacctgaatttacatatggtaatattcatctcttaccaaaaacaagtcatttatggata ttatcagggagggccgtgcaaatccagtctagctcccttttcgctccacaaggaccaaga tcaaacgaacgctcattctctttctgtcaacgaatatatatttctaatccctcattgact aatgatcaagtgaggcacaaattttttagttcggatttttctggtaaaaaaaaagatagg attcctgattattccgaacttaatcgaatcgtatgcactggtcattataatcttatctat ccttccattctccatgataattcggatttattggcaaagaggcgaagaaatagattcatc attccactccattcgattcaagaacgagagaaagaactaatgcccccttcaggtatttcg attgaaatacccataaatggtattttccgtagaaagagtattcttgcttatttcgatgat cctcgatacagaagaaaggggtcgggaattactaaatatgggactatagacgtgcattca tttgtcaaaaaagaggatttgattgagtatcgaggagtcaaggaatttaggccaaaatac caaatgaaagtagatcgattttttttcattcccgaggaagtacatctattacctggatct tcttccataatggtacggaacaatagtatcattgggatagatacacaaatcactttaaat acaagaagccgagtaggcgggttagtccgagtggaaagaaaaaaaaaaagaattgagctt aaaatcttttctggagatctccattttcctggagagacagataagatatcccgacacagt ggcatcttgataccaccaggaataggaaaaaaaaattctaaagcatccaaaaattggatc tatgtccaacggatcacacccaccaagaaaaagtattttgttttggttcgacctgtagtc acatatgaaataacggacggtataaatttagcaacacttttccccccggatctactccag gaaagggataatgtgcaacttcaagttgttaattatatcctttatggaaacggcaaacca attcggggaatttctaacacaagtattcaattagttcggacttgtttagtattgaattgg gaccaagaaaaaaaaagctcttctatcgaagaggcccgtgcttcctttgttgaaataagg acaaatggtttgattcgagatttcctaagaatcgacttagtgaaatcctctatttcgtat actggaaaaagaaaggatccgtcgagttcaggattgatctctgataatggatcagatcgc accaatatcaatccgttttcttccacttttttctattccaaggcaaagattcaacaatcc cttaaccaaaatcaaggaactattcatacgttgttgaatagaaataaggaatgccaatct ttgataattttgtcatcatccaattgttctcgaatgggtccattcaatgatgtaaaatcg tccaatgtgataaaagaatcaattaaaaaaaatcccccaatgccaattaggaattcgtta ggccctttaggaatagcttttaaaattgcgaatttttatttattttactatttaataacc tataatcagatcctggtaactaactatttacaacttgacaatttaaaacagatttttcaa gtaattaaatattatttaatggatgaaaatgggaaaatttataatcccgatccatgcagt aacatcattttgaatccattcaatttgaattggtattttctccatcccaattattgtgaa aagacatctacaaaaatgagtcttggacagtttatttgtgaaaatgtatgtatagtcaaa aacgggccacacctaaaatcgggtcaagttctaattgttcaagttgactctgtagtaata cgatccactaagccctatttggccactccaggagcaaccgttcatggacattatggggaa atattttacgaaggagatacattagttacatttatatatgaaaaatcgagatctggtgat ataacgcagggtcttccaaaagtggaacaagtattagaagtgcgttcgattgattcaata tcgatgaatctagaaaatagggttgagggttggaacgaacgtataacaagaattcttgga attccttgggtattcttgattggtgctgagttaactatagtgcaaagtcgtatctctttg gttaataagatccaaaaggtttatcgatcccaaggggtacagatccataataggcatata gaaattattgtacgtcaaataacagcaaaagtgttggtttcagaagatggaatgtctaat gttttttcacccggagaactaattggattgttgcgagtggaacgaatggggcgtgcttta gaagaagcgatctgttaccgagccatcttattgggaataacaagagcatctctgaatact caaagtttcatatctgaagcgagttttcaagaaactgctcgagttttagcaaaagctgct ctccggggtcgtatcgattggttgaaaggcttgaaagagaatgttgttctggggggaatg atacctgttggtaccggattcaaaggattaatgcccccttcaaggcaacataacaacatt cctttggaaaccaaaaataagaatctattcgagggagaaatgagagatattttgttccac cacagaaaattatttgattcttgtctttcaaagaatttccatgatacatcagaataa

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