Cronobacter sakazakii ATCC 29544: CSK29544_00707
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Entry
CSK29544_00707 CDS
T03903
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csj
Cronobacter sakazakii ATCC 29544
Pathway
csj03420
Nucleotide excision repair
csj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSK29544_00707
03430 Mismatch repair
CSK29544_00707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csj03400
]
CSK29544_00707
Enzymes [BR:
csj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSK29544_00707
DNA repair and recombination proteins [BR:
csj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSK29544_00707
MMR (mismatch excision repair)
Other MMR factors
CSK29544_00707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKE93671
UniProt:
A0A2S9U9S6
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All DBs
Position
complement(737304..739466)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDDGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQACRQLLQEKALAGRAASALQRFLELIEALAHETIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASVSRPVSHKQLG
APIAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcgggcgcgggcagcggaaagacgcgcgtgctggtg
catcgtatcgcctggctgatgatggtagaaaactgttcgccgtactccatcatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgcatcggccagctgatgggcacc
agccagggcggcatgtgggtcggcacgttccacggtctcgcccaccgcctgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagcgaagatcagctg
cgcctgctcaagcgtctcatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggcaaaaaagatgacggcctgcgcccgcaccatattcag
agctacggcaacccggtagagcagacctggcagaaggtgtatcaggcgtatcaggaagcc
tgcgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaataaaccgcatattctcaatcactaccgcgagcgcttcaccaatattctggtggat
gagttccaggacaccaacggcattcagtacgcctggatccgcctgctggcgggcgacacc
ggcaaagtgatgatcgtgggtgatgatgaccagtcgatttacggctggcgcggcgcgcag
gtggagaatattcagcgcttcctgaatgactttccgggcgcgcagactattcgcctcgaa
caaaactaccgctccaccaacaatattcttaacgccgcgaacgccctgatcgccaataac
gccgggcgtcttggtaaagagctgtggaccgacggcagcgacggcgagcctatctctctc
tactgcgcgttcaacgagctggatgaagcgcgctttgtggtcaaccgcatcaaggtatgg
caggagaacggcggcgcgttgcaggattgcgccatcctctatcgcagtaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggcgagcatgccgtatcgcatttacggcggtatg
cgattcttcgaacgccaggagatcaaagacgcgctctcttacctgcgtcttatcgccaac
cgtaacgacgacgcggcctttgagcgcgtggtgaacacgccgacgcgcggcatcggcgac
cgcacgctggatgtcgtgcgccagaccgcgcgagaccgccaactgacgctctggcaggcg
tgccgccagctgttgcaggagaaagccctggccggccgcgccgccagcgctttgcagcgt
ttccttgagcttatcgaagcgctggcgcatgaaaccatcgatatgccgctgcacgtgcag
actgaccgggtaattaaagattccggcctgtggctgatgtatgagcaggaaaaaggcgaa
aagggccaggcgcgtatcgaaaacttagaagaactggtcacggcgacgcgccagttcagc
tacaacgaagaagacgaagatctgatgccgctgcaggcgtttttgtcccacgcggcgctg
gaagcgggcgaagggcaggccgacgcctggcaggacgcggtgcaactgatgacgctgcac
tccgccaaagggctggaattcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccaagccagatgtcgcttgatgaaggcgggcgtctggaagaggagcgacgcctggcctat
gtgggcgttacccgcgccatgcagaagctgacgctcacgtatgcggaaacccgtcggctg
tacggcaaagaggcgtatcaccgtccgtcgcggtttatcgctgagttgccggaaggctgt
gtggaagaggtgcgcctgcgcgcgagcgtgagccgtccggtcagccataagcagctgggc
gcgccgatagcgcagaacgactccggttataagcttggccagcgcgtgcgccacccgaaa
ttcggtgaaggcaccatcgtgaatctcgaaggcagcggcgaacacagccggttgcaggtg
gcgttcaacggtcagggcattaaatggctggtggccgcttacgcgcgcctcgaaaccgtc
tga
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