Cronobacter sakazakii ATCC 29544: CSK29544_00841
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Entry
CSK29544_00841 CDS
T03903
Name
(GenBank) Rhs-family protein
Organism
csj
Cronobacter sakazakii ATCC 29544
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Tox-SHH
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
AKE93804
LinkDB
All DBs
Position
complement(892941..897524)
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AA seq
1527 aa
AA seq
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MSELLAARIDDPLIHSSLLADVVSGAVEGAICLAAITAGSAMMGTGLGTVAGVVLIAAVF
TTGVAEDAGDLVGQGVDAVLDFFGWLGPPDAIIKTGSHNVRIMEKAAARAAGTVDHNYLN
TPIPQESFGDQAKAFAIGTAVAILEVAQFTLHPLDNLAAGASAIASSGWDGVKKFAGSVW
DNFTQPVVAGASPYAKAAPGDIVVCTKGHTVTGTNYLAEGSKKVLINGQPASRNGDRSTC
EAKVKVKENTRVRIGGESIVVRDIRSGKNFWARLIGNTIGSLGPAIIRNLSKGMLKTLFS
RQIMKTFCCQFAADLGMGLTTFGLIQAGKVGSEARQTQHPVDIASGAKILAGGEDRDFTL
EDRIPLIWQRVYNSRNLATGMLGTGWLLPFETRFFRLENNQFIWRDMSGRELGFGELTPG
DVVDYLEDGVTLYYTVSGTLMLQMTSGEYHVYEPDPTRPGEWRLFRIYDRHENCQYYSWD
EHGRLVRISGDNEALDVELAYEKTHGRLASVHQVCNGERRLLVTYGYNEHGQLTDVTDAD
GIVTRRFGWDRASDMMGWHSYATNLSVHYQWQPAADAPNWRVCSYQVLDDQDNVLERWRI
DADEAKRCATVSCDAGFSTRHCWDFLYRITEYTDRHGGVWRYEWADYAELLTAATTPDGS
RWVYGHDEHGNLTEVRDPLGNSTFTTWHPVFAFPVKEVLPDGATWQYEYNPRGDVVSLTD
PKGGVTRFEWNEQGDLVQQTDALNNTHRFWWNERGQLVRDEDCSGNQSQRLYDDAGRPLS
ASDAEGNTDRWTLTAAGRLRTWRRADGRETHYEYDNAGLLCGQDDDGLRERKVTRNARGQ
VVSAADPAGHLTRLRYDRFGRLTTLVNPNRESWRFEYDAAGRLTGQRDYAGRLTEYRHDA
LGRVTEVIRHPLPGSADAPLVTAFEYDVLGRLTARETAEHRTEYRHSTLSLEIRRATRAE
WRQALLEEREPEWDAVLVFTRNAAGELVSEENHGGKFEYGYDALGNLSSTTFPDGRELAT
LRYGTGHLLEMQLRHGGAMHTLAAYGRDRLHREISRSQGVLSQETRYDAAGRVTQRTVLD
ARRELVFERRYRWDRTDQIVQQIHTDTTPATPGEKYSQYLWGYDAAGQVTKAVEPQKEER
FFWDPAGNRTEEHRNPVWHNLLLRLDGLKLDYDGFGRLTRRQDKRGVVQQFSYDDEQRIK
EITFTGHAEFKKVEYRYDPLGRRTHKILWRYGEKDPETIRFDWQGLQLAGEQSDREPDHY
VQYVYTEGSYEPLARIDSVFDDCEIYWYHTELNGLPERVTDADGQTVWRGQFSTWGETER
ELSVPQWQVPQNLRFQGQYLDRESGLHYNLFRYYDPVAGRYTQMDPIGLAGGLNTYSYVG
DPLTWVDPWGLEPCIHFNKTHKDSLPKPKGMGPNGGRLQSHHGLQQEWAINNLSQYGYNP
KLAPTVTIETGKGLPHTIISNAQNARRDLRVAQGQGKWSSSLQDELNNIVTDFRDAGFKD
DVIKKILDQQYKMLDKLNVPYNKVDVL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaactgttagctgcccgtatagatgatccgctcatccacagctctctgctcgcc
gatgtcgtcagtggcgcggtggagggggctatctgtcttgccgccataacggcgggttcg
gcgatgatgggcacggggctgggtacggttgcgggcgttgtactgattgcggccgtattc
accacgggtgttgcagaggacgccggcgatctggtggggcaaggcgtcgatgctgtgctg
gatttcttcggctggctcggcccgccggatgcgattatcaagacaggctctcacaacgta
cgcattatggaaaaagccgccgcgcgcgcggcgggcacggttgatcacaactatctcaat
acgcccatcccgcaagagagctttggcgatcaggcgaaggcatttgcgataggcaccgcg
gttgccattctcgaagtggcgcagtttaccctgcacccgctggataacctggcggcagga
gcaagcgccatcgccagcagcggctgggatggagtaaaaaaattcgcgggcagcgtttgg
gataacttcacgcaacccgtcgtggcgggtgccagcccgtacgctaaggcggcgccgggc
gatatcgtggtgtgcaccaaaggccatacggtgaccggcaccaactacctggcggaaggc
tcgaaaaaagtgctgatcaatggccagcccgcgagccgcaacggcgatcgcagcacctgc
gaagccaaagtcaaagttaaagaaaacacgcgcgtgcgcatcggcggcgaaagcatcgtg
gtgcgcgatatccgcagcggtaagaatttctgggcgcggcttattggcaacaccatcggc
agccttggcccggcgattatccgcaacctcagcaaagggatgctgaagacactcttcagc
cgccagatcatgaaaaccttttgctgccagtttgccgccgatctcggcatgggcctgacg
acattcgggctgattcaggcaggcaaagtgggcagcgaggcgcgccagacgcagcacccg
gtggatatcgccagcggcgcgaaaattctcgcgggcggcgaagaccgcgatttcacgctg
gaagatcgcattccgctcatctggcagcgtgtctacaacagccgcaatctggcgaccggt
atgctcggcaccggctggctcctgccgtttgagacccgctttttccgccttgagaacaat
cagtttatctggcgcgatatgtcgggccgcgagctgggcttcggcgagctgacccccggc
gacgtggtggattatctcgaagacggcgtcacgctctattacaccgtcagcggcacgctg
atgctccagatgacgagcggcgaataccacgtctacgaaccggacccgacgcgtccgggc
gagtggcggctgttccgcatctacgatcgtcacgagaactgccagtactacagctgggat
gaacacggcaggctggtgcggatttccggcgacaacgaagcgctggatgtcgaactcgcg
tatgagaaaacgcatggccgactcgccagcgtgcatcaggtatgcaacggcgagcgccgc
ctgctggtgacttacggttataacgaacacggccagttgactgacgtgaccgacgcggac
ggcatcgtcacgcgccgcttcggctgggatcgcgccagcgacatgatgggctggcacagc
tacgccaccaacctcagcgtgcattatcagtggcagcccgccgccgatgcgccgaactgg
cgcgtgtgcagttatcaggtgctggatgaccaggacaacgtgctggagcgctggcgcatc
gatgccgacgaggcgaaacgttgcgccacggtcagctgcgacgcgggtttctcgacgcgc
cactgctgggatttcctctaccgcatcacggaatacaccgaccgccacggcggcgtgtgg
cgctacgagtgggcggattatgccgagctgctgaccgcggccaccacgccggacggcagc
cgctgggtatacggccacgacgagcacggcaacctgacggaagtgcgcgacccgctcggc
aacagcacgttcaccacgtggcacccggtgttcgcgttcccggtgaaggaggtgctgccg
gacggcgccacctggcagtatgaatacaacccgcgcggcgatgtggtctcgctcaccgac
ccgaaaggcggcgtgacgcgctttgagtggaacgagcagggcgacctggttcagcagacc
gacgcgctgaacaacacgcaccggttctggtggaacgagcgcgggcagctggtacgcgac
gaggactgctccggcaaccagagccagcggctttacgacgacgcggggcgaccgctgagc
gccagcgacgccgaaggcaacaccgaccgctggacgctgactgcggcagggcgtctgcgc
acctggcggcgggcggacggccgcgagacgcactacgaatatgacaacgccgggctgctc
tgcgggcaggacgacgacgggctgcgcgagcgtaaggtgacgcgcaacgcgcgcggccag
gtggtgagcgccgccgacccggcgggccatctgacgcgcctgcgctacgaccgcttcggc
cgcctgacgacgctggtgaacccgaaccgcgagagctggcggtttgagtatgatgccgca
ggccgcctgacgggccagcgggattacgcgggccgcctgacggaataccgccacgacgcg
ctgggccgggtgacggaggtgattcgccatccgctgccgggcagcgcggacgcgccgctg
gtgactgcctttgaatatgacgtgctgggccgcctcaccgcccgggaaaccgcggagcac
cgcaccgagtaccgccacagcacgctgtcgctggaaatccgccgcgccacgcgcgccgaa
tggaggcaggcgctgctggaagagcgcgagcctgagtgggacgccgtgctggtcttcacc
cgaaacgcggccggcgagctggtgagcgaggagaaccacggcgggaagtttgaatacggg
tacgatgcgctcggcaacctcagcagcacaacattcccggatggccgcgaactcgccacg
ctgcgctacggcaccggtcatctgctggagatgcagctgcgccacggcggggcaatgcac
acgctggcggcgtacggccgtgaccggctgcaccgggaaatctcccgcagccagggcgtg
ctctcgcaggaaacccgttatgacgccgcagggcgcgtcacgcagcgcacggtgctggat
gcccgccgggagctggtgtttgagcgccgctaccgctgggaccgcaccgaccagatagtc
cagcagatacacaccgacaccacgcccgcaacgccgggcgagaaatacagccagtacctg
tggggctacgatgccgccggtcaggtcacaaaagccgttgaaccgcagaaagaagaacgc
ttcttctgggacccggcaggcaaccgcactgaggagcaccgcaacccggtgtggcacaac
ctgctgctgcgcctcgacgggctgaagctggactatgacgggttcggcaggctcacgcgc
cgtcaggataaacgcggtgtggtgcagcagttctcgtatgacgatgagcaacggataaaa
gaaatcaccttcaccggtcatgcggaattcaaaaaagtggaataccgctacgacccgctg
ggccgacgcacgcataaaatcctgtggcgctacggtgagaaagacccggaaaccatccgc
ttcgactggcagggtttacagctcgccggtgaacagagcgaccgggagccggaccactac
gttcagtacgtctacaccgaaggcagctacgaaccgctggcgcgcatcgacagtgttttc
gacgactgcgaaatttactggtaccacaccgaactcaacggcctgccggaacgggtgacg
gacgcggacgggcagaccgtctggcgcggacagttcagcacctggggtgaaacggaacgc
gaactcagtgtgccgcagtggcaggtgccgcagaacctgcgcttccagggtcagtacctc
gaccgcgaaagcggcctgcactacaacctgttccgctattacgacccggtggccgggcgt
tacacccagatggacccgattgggttagcgggcgggctgaacacgtattcctacgtgggt
gatccgctgacgtgggtggatccgtgggggttggaaccttgtattcattttaacaaaaca
cataaagattcattaccgaaaccaaaaggaatggggcctaatggcggtcgattacagtcg
catcatgggttacaacaagagtgggcgattaataacctttcgcagtatggttataatcct
aaactagcacctactgtaacgatcgaaacaggtaaaggattgcctcatacaataatatct
aacgcacaaaatgccagacgtgacctgcgagttgcacaaggtcaaggaaaatggtcatct
tctctacaagatgagttaaataatatagttaccgatttccgtgatgcaggtttcaaagat
gatgtcataaaaaaaatccttgatcagcaatataaaatgcttgataaacttaatgttcct
tataataaggtggatgttttatga
DBGET
integrated database retrieval system
