Cronobacter sakazakii ATCC 29544: CSK29544_01747
Help
Entry
CSK29544_01747 CDS
T03903
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csj
Cronobacter sakazakii ATCC 29544
Pathway
csj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CSK29544_01747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csj03400
]
CSK29544_01747
Enzymes [BR:
csj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CSK29544_01747
DNA repair and recombination proteins [BR:
csj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSK29544_01747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
CbiA
DEAD
AAA
SRP54
AAA_33
UvrD_C
TrwB_AAD_bind
T2SSE
MukB
ATPase
Motif
Other DBs
NCBI-ProteinID:
AKE94705
UniProt:
A0A7V7RDV8
LinkDB
All DBs
Position
1838349..1840184
Genome browser
AA seq
611 aa
AA seq
DB search
MKMHQLIQQAVVQKLLRPLDAQFAMMVASDDEPAVMLAAALVSRDAGEGHVCMPLSRLCA
AHCFAGRHDEMAQTLFEAAGNPDDWRSLLLASPAVSEDDAPTPLKLIGERLYLNRMWRHE
RAVAAFFRERNHSIELEEARLSAVLEALFGPPGDEVDWQKVAAAVALTRRISVISGGPGT
GKTTTVAKLLAAMVQLSEEKLPRIRLAAPTGKAAARLTESLGAALRRLPLSDAQKNALPE
EASTLHRLLGAQPGSQRLRYHEGNPLHLDVLVVDEASMIDLPMMARLIAALPDHARVIFL
GDRDQLASVEAGAVLGDICHYVNHGFTTERATELARITGCHINGGEPHPAGALRDCLCLL
QKSYRFGSDSGIGQLAFAVNRSDHRAARATFSRGFDDIACKTLAGNDDYAQMIDETLAGY
ERFLTLVRERAEPEAILAAFSEFQMLCALREGPFGVAGLNERVEHALAQRRLIRRTPLSR
WYEGRPVMISRNDSALGLFNGDIGVALDRGDGLRVWFPMPGGKLKPVVPSRLPDNDTAWA
MTVHKSQGSEFDHAALLLPGQFAPVVTRELVYTAITRARRRLSLYADERVLEMAIATRTE
RRSGLMACFEQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatcaactgatccagcaggccgtagtgcaaaagcttttgcgcccgctggat
gcccagtttgcgatgatggtggcaagcgatgatgaaccggcggtgatgctcgccgccgcg
ctggtgagccgcgatgccggtgaaggccacgtctgtatgccgctctcccggctgtgtgca
gcgcactgcttcgccgggcgtcacgatgaaatggcgcaaacgctatttgaggcggcgggc
aatccggacgactggcgctcgctcttactggcatcgcctgcggtgagtgaggacgacgcg
ccgacgccgctgaagctcatcggcgagcgtttgtatctgaaccgtatgtggcgtcatgag
agggcggtcgcggcgttctttcgcgagcgtaaccatagtattgaactggaagaagcgcgc
ctgagcgcggtactggaggcgctttttgggccaccaggcgatgaagtggactggcagaaa
gtggcggcggcagtcgcgctcacccggcgcatctcggtgatttccggcgggccgggcacc
gggaaaaccaccacggttgcgaaactgctggcggccatggtgcagctctcggaagagaaa
ctgccgcgtatccgccttgccgcgccgaccggtaaagccgcggcgcgcctgacggaatcg
ctcggtgctgcgctgcgtcgtttgccactgagcgacgcgcagaaaaacgcgctgccggaa
gaagccagcacgctgcaccgcctgctgggtgcgcagccgggcagccagcgtctgcgctac
cacgaaggtaacccgctgcatctggatgttctggtggtggatgaggcttcgatgatagac
ctgccgatgatggcgcggcttatcgcggcgctgccggaccatgcgcgggtgattttttta
ggcgatcgcgatcagctggcgtccgtggaggcgggcgcggtgctcggtgatatctgccac
tacgtgaaccacggttttaccactgaacgcgccaccgagcttgcccgcatcacggggtgt
cacattaacggcggtgagccgcatccggccggggcgctgcgcgactgcctgtgcctgctg
cagaaaagttatcgctttggcagcgattccggcattgggcagctcgcgtttgccgttaat
cgcagcgatcatcgcgccgccagagcgacgtttagccggggctttgacgatatcgcctgc
aagacgctggcgggtaacgatgactacgcccagatgattgacgagacgctggcaggctac
gagcggttcttaacgctggtacgcgaacgtgccgagccggaggcgattcttgcggccttc
agcgaattccagatgctctgcgcgctgcgtgaagggccgttcggcgtcgccgggcttaac
gagcgtgtggaacatgcgctggcgcagcggcgtctgattcgtcgcacgccgctgtcgcgc
tggtatgaagggcggccggtgatgatttcgcgcaacgacagcgcgctggggctgtttaac
ggcgatatcggcgtggcgctggatcgtggcgacggcctgcgcgtctggttcccgatgccc
ggcggcaagctgaaacccgtcgtgccaagccgcttgccggataatgacaccgcgtgggca
atgacggtgcataaatcacagggttcggagttcgatcatgcggcgctactcctgccaggg
cagttcgcgccggtggtcacgcgggagctggtctatacggcgattacgcgcgcgcggcgg
cggttgtcgctgtatgcggatgagcgggtgctggagatggccatcgcgaccagaacagaa
cggcgcagcggcctgatggcctgctttgaacaataa
DBGET
integrated database retrieval system
