Cronobacter sakazakii ATCC 29544: CSK29544_02936
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Entry
CSK29544_02936 CDS
T03903
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csj03000
]
CSK29544_02936
Transcription factors [BR:
csj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CSK29544_02936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
HTH_1
HTH_psq
Xre-like-HTH
AAA_3
HTH_28
AAA_22
HTH_7
HTH_22
HTH_23
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AKE95887
UniProt:
A0A7V7RGC0
LinkDB
All DBs
Position
complement(3042236..3044041)
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AA seq
601 aa
AA seq
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MPHSASLTSAGVTPYCDDLSFPCLLNDSWQRSQRYGLTRNDDATSFVSRALLEEARSQHG
WLKTLARPLMQRLGESLSRAPSVVVATDDTGLVLDTFGNNQFLHKAQRVALAPGNLWGEH
ARGTNAIGTALALHAPCEVHGSQHFLNQNAGLYCYGVPVFRPDGQIAGVLDLSTPARQPV
AEAGRLMRQAVRQLEHDWVIAQLDAQQWLLRLHTDPTALGSAQELLLAFRDNRLVAANKL
AMDEFKLSTAHIGTLSLDALFPQALPASDDTALTAINQRRYHTRRQLPARRVWAAYPAIS
QEEESGVETAKALRLLNAGIALCITGETGCGKEHLSRRLHQQSQWRDGPFVAINCAALPE
QLIESELFGYQPGAFTGASSRGYIGKIREADGGVLFLDEIGDMPLAMQTRLLRVLQEKKV
VPLGGTRAVPVTFTLICATHRPLDEMVARGAFREDLFYRIEEYRLRIPPLREWPALPRFV
QRLWQELGGARRGVTLSADLVEHIARLPWPGNVRQLASLLKVLLALADDGDVVTLNDLPP
PYCSVAGHKEPAQPSENAAPDVDAILQSVNGNMSLAARKLGVSRSTLYRRLEKQRASAGV
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcgcctcgttgacctccgcaggcgtaacgccgtactgcgacgacctgtct
tttccgtgtctgctgaatgactcctggcagcgcagccagcgctacgggctgacccgcaac
gatgacgccacctcgtttgtcagccgcgccctgcttgaagaggcgcgatcgcaacacggc
tggctgaaaacgctcgcccgcccgctgatgcagcggctcggtgagagcctgagccgcgca
ccgtcggttgtggtcgccacggacgataccggtctcgtgctggataccttcggcaataat
cagtttctgcataaggcgcagcgcgtggcgctcgcgcccggtaatctgtggggcgaacac
gcgcgcggcacgaacgccatcggcaccgcgctggcgctgcacgcgccgtgcgaggtccac
ggcagccagcatttcctcaatcagaacgccgggctttactgctacggcgtgccggtgttc
cgtccggacgggcaaatcgcgggcgtgctggatctctccacgcctgcacggcagcccgtg
gccgaggcaggccgcctgatgcgtcaggccgtgcgccagctggagcacgactgggttatc
gcgcagctcgacgcccagcagtggctgctgcgcctgcacaccgacccaaccgcgctcggc
tcggcacaggagctgctgctggcgttccgcgataaccggctggtggccgccaataaactg
gcgatggacgaattcaagctttccaccgcgcatatcggcacgctctcgcttgacgcgctg
ttcccgcaggcgttgcctgcaagtgatgacaccgcccttaccgccattaaccagcgccgc
taccacacccgccgtcagcttccggcgcggcgcgtctgggccgcgtatcccgcgatttcg
caggaagaagagagcggcgttgaaaccgccaaagcgctgcgcctgctgaacgcgggcatc
gcgctgtgcattaccggcgaaaccggctgcggcaaagaacacctgagccgccgcctgcat
caacaaagccagtggcgcgacggcccgttcgtcgccattaactgtgctgcgctgcccgag
caactgattgagtcggaactttttggctaccagcccggcgcgtttaccggtgccagcagc
cgcggctatatcggtaaaatccgcgaagccgacggcggcgtgctgtttctggatgaaatt
ggcgatatgccgcttgccatgcagacccgcctgttgcgggtgttgcaggagaaaaaagtg
gtgccgctcggcggcacccgcgccgtaccggtgacctttacgcttatctgcgccactcac
cgtccgctggacgagatggtggcgcgcggggcgtttcgcgaagatctcttttaccggatt
gaagagtaccggctgcgcattccgccgctgcgcgagtggcccgcgctgccgcgttttgtc
cagcggctgtggcaggagctgggcggggcgcgccgcggcgtcacgctgtctgccgatctg
gttgagcatatcgcgcgtctgccgtggccgggaaacgtgcgccagcttgcgagcctgctg
aaagtattgctggcgctggcggacgatggtgacgttgtcacgttaaacgacctgccgccc
ccctattgttctgtggccggacataaagaaccggcgcagccttcagagaacgctgcgccg
gatgtggacgccatcttgcagagcgtgaacggtaacatgagccttgcggcgcgtaagctt
ggcgtctcgcgcagtacactctaccggcggcttgagaaacagcgcgctagcgcaggcgtc
cgctga
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