Cronobacter sakazakii ATCC 29544: CSK29544_03368
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Entry
CSK29544_03368 CDS
T03903
Name
(GenBank) formate hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csj03000
]
CSK29544_03368
Transcription factors [BR:
csj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CSK29544_03368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
AAA
AAA_19
Mg_chelatase
AAA_16
HTH_8
AAA_2
AAA_30
AAA_7
MCM
HTH_50
nSTAND3
AAA_22
DUF815
Motif
Other DBs
NCBI-ProteinID:
AKE96316
LinkDB
All DBs
Position
3479055..3481115
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AA seq
686 aa
AA seq
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MSDLGQQGLFDITRTLMRQPDLCALAEALKSLLNASGMADRVNILLYHPKHQRTCFYSVD
SVGNAVTYEDETVLSHGPVRRLLSRPEVLHCQYDEFAETWPQLAALPLYPAFGYYCLAPL
AAEGHIFGGCEFIRDTPESFSEKEFSRLQTLTQIVSVAAEQIQTRLGNSQDYALLCRERD
DFRILVAITNAVLSKLHLDELVTEISHEIHRYFSIDSISIVLPAARKGKLTIYSTHYVDE
AAPLHDQSEVQEKGTLSARVFSSREMLLVNLHQRDDLAPYEQMLFEMWDNQIQTICLLPL
MFGEKMLGVLKLAQCEEHIFTAANLKLLRQIAERIAIAVDNALAYQEIHRLKERLVDENL
ALTEQINNVPADFGEIIGRSDAMMAVMKQVEMVAKSDSTVLILGETGTGKELIARAIHNL
SDRNGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDM
PLDLQPKLLRVLQEQEFERLGSNKVIQTDVRLIAATNRDLRQMVADREFRSDLYYRLNVF
PIHLPPLRERPEDIPLLVKAFTFKIARRLGRSIDSIPAETLHALSEMEWQGNVRELENVI
ERAVLLTRGNVLQLSLPELTPRPAKKPVAPPVDVRDGEDEVARITRVLKETNGVIAGPKG
AAARLGVKRTTLLSRMKRLGIDKEAL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctcggccagcaagggctgttcgacatcactcgcactctgatgcgccagccc
gatctctgcgcgctggcggaggcgctgaaatcgctgcttaacgcctccggcatggcggat
cgggttaacattctgctgtatcacccgaaacatcagcgtacctgtttttacagcgtcgac
agcgtcggcaatgctgtgacgtatgaagacgaaacggtgctctctcacggcccggtgcgt
cggctgctctcgcgccccgaagtgctgcactgccagtatgacgaattcgccgagacctgg
ccgcagcttgcggcactcccgctctacccggcctttggctactactgcctggccccgctc
gccgccgaaggccatattttcggcggctgcgagtttattcgcgacacgcccgaaagcttt
agcgaaaaagagttttcccggctgcagacgctgacgcaaatcgtgagcgtcgcggcggag
caaatccagacgcggcttggcaacagccaggattacgcgctgctgtgccgggagcgcgac
gactttcgcattctggtcgccatcactaacgcggtgctctccaaactgcatctcgacgag
ctggtgaccgagatttcgcatgagatccaccgctatttcagcatcgactccatcagtatc
gtcctgccggcggcgcgcaaaggcaaactgacgatttactccacgcactatgtcgatgaa
gccgcgccgctgcacgatcagagcgaagtgcaggagaaaggcaccctctcggcgcgcgtg
ttcagctcgcgcgaaatgctgctggtgaatctgcaccagcgcgacgatctcgcgccttac
gaacagatgctgtttgagatgtgggataaccagatccagaccatctgcctgctgccgctg
atgtttggcgagaagatgctgggcgtgctgaagctcgcacagtgcgaggagcatattttc
accgccgctaatttaaaactgctgcgccagattgccgagcgcatcgcgattgcggtggat
aacgcgctggcgtaccaggagatccaccgccttaaagagcggctggtggatgagaacctg
gcgctgaccgagcagattaacaatgttccggcggatttcggcgaaatcatcgggcgatcg
gatgcgatgatggccgtgatgaagcaggtggaaatggtcgccaaaagcgacagtacggtg
ctaattcttggcgaaaccggcaccggcaaagagcttatcgcgcgcgcgattcataacctg
agcgaccgcaacgggcggcgcatggtgaagatgaactgcgcggcgatgcccgcagggctt
ctggaaagcgatctcttcggccatgagcgcggcgcgtttaccggcgccagcgcccagcgc
atcgggcgttttgagcttgccgataaaagcagcctgtttctggatgaagtgggcgatatg
ccgctggatttgcagccgaaactgctgcgcgtgttgcaggagcaggagtttgagcggctc
ggcagcaacaaagttatccagaccgacgtgcggctgattgccgccaccaaccgcgattta
cgccagatggtggcggaccgcgagttcagaagcgatctttactaccgcctgaacgttttc
ccgatccatctgccgccgctgcgcgagcgcccggaggatattccgctgctggtgaaggcg
ttcacctttaaaatcgcgcgccgtctggggcgcagcatcgacagtattcccgccgaaact
ctgcatgctctgagcgagatggagtggcagggtaacgtgcgcgagctggagaacgtgatt
gagcgcgcggtgctgttgacgcgcggcaatgtgttgcagctctcgttgccggagctgacg
ccgcgtccggcgaaaaaaccggtcgcgccgcccgttgatgtgcgcgacggtgaagatgag
gtggcgcggataacgcgggttttgaaggaaaccaacggggtgatcgccgggccaaaaggc
gccgccgcgcgcctgggcgtgaagcgcacaacgctgctttcacgaatgaagcggctggga
atcgataaggaagcgctgtaa
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integrated database retrieval system
