Cronobacter sakazakii ATCC 29544: CSK29544_03933
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Entry
CSK29544_03933 CDS
T03903
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csj03400
]
CSK29544_03933
Enzymes [BR:
csj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CSK29544_03933
DNA repair and recombination proteins [BR:
csj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CSK29544_03933
Prokaryotic type
CSK29544_03933
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AKE96878
UniProt:
A0A7V7RDH2
LinkDB
All DBs
Position
complement(4064373..4065794)
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AA seq
473 aa
AA seq
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MTTHLVWFRADLRVNDNLALAAACRDPDARVIGLFIATPQQWRDHTLAPRQAAFIHQNLE
ALQQALAKRGIALFTREVPDFAAAVDALAAFCDEQQVSALFYNYQYELNEARRDAAVERR
LEGRVACQGFDDSVMLPPGSVVTGNGEMYKVFTPYSRAFLRRLGEGLPPCVSAPKPRAGG
AITDIPPLAPFDYPSESPDALLFPAGEEAALKRLREFCQTAAGDYPEKRDFPAIRGTSLL
SAYLAIGVLSPRQCLHRLLTEHPRALEGGSGAVWLNELIWREFYRHLIVAWPHLCRHQPF
IDWTARVAWQQNDAHFQAWCEGNTGYPIVDAAMRQMNATGWMHNRLRMITASFLVKDLLV
DWRRGERYFMSQLIDGDFAANNGGWQWAASTGTDAAPYFRIFNPTTQGQRFDAEGEFIRR
WVPELSHIPGKAVHEPHLWAKKNGKALRYPQPIVDHKQARVATLAAYEAARKE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggtttcgcgcggatctgcgcgtcaacgacaatctggcgctc
gccgccgcctgccgtgaccccgacgcgcgggtcatcggcctgtttatcgcgaccccgcag
caatggcgcgatcacaccctcgcgccgcgtcaggcggcgtttattcaccaaaatctggaa
gccctgcaacaggcgctggcgaagcgtggcattgcgctgtttacgcgcgaggtgcccgat
ttcgccgccgccgtggacgcgctggccgcgttttgcgatgagcagcaggtttccgcgctc
ttttataactatcagtatgagctgaacgaagcccggcgcgacgccgccgttgagcgcagg
ctggagggccgcgtcgcctgtcagggctttgacgacagcgtgatgctgccgcccggaagc
gtcgtcaccggcaacggcgagatgtataaagtattcacgccttacagccgggcgttttta
cgccgtctcggcgaaggattaccgccctgcgtcagcgcgccgaagccgcgcgcgggcggc
gccattaccgacataccaccgcttgcgccgttcgattacccgagtgagtcgccggacgcg
ctgctgttcccggcgggcgaagaggctgcgcttaaacgtctgcgggagttttgccagacg
gccgcgggcgactacccggaaaagcgcgatttcccggcgattcgcggcaccagtttattg
tcggcatatctcgccatcggcgtgctgtcgccgcgccagtgcctgcatcgtctgttaacc
gaacacccgcgcgcgctggaaggcggcagcggggcggtgtggctgaacgagcttatctgg
cgcgaattttaccgacaccttatcgtcgcctggccgcacctgtgccgccatcagccgttt
atcgactggacggcgcgggtggcgtggcagcagaacgacgcccattttcaggcgtggtgc
gaaggcaacacggggtatcccattgtcgatgccgccatgcgccagatgaatgccaccggc
tggatgcataaccgcctgcggatgatcaccgcgagctttctggtcaaagacttactggtc
gactggcggcgcggtgaacgctattttatgtcgcaattgattgacggcgattttgccgcc
aataacggcggctggcagtgggctgcctccaccggcaccgacgccgcgccctatttccgc
atcttcaaccccaccacgcaggggcagcggtttgacgctgagggcgagtttatccgccgc
tgggtgccggaactgagccatattcccggcaaggcggtgcatgagccgcatctgtgggcg
aagaaaaacggcaaggcgctgcgttatccgcagcccatcgtcgatcataaacaggcgcgc
gtcgcaacgctcgcggcgtatgaagcggcccgcaaggaataa
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