Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
csk Cronobacter sakazakii ES15
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csk00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ES15_0021 (polA)
03410 Base excision repair
ES15_0021 (polA)
03420 Nucleotide excision repair
ES15_0021 (polA)
03440 Homologous recombination
ES15_0021 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:csk03032]
ES15_0021 (polA)
03400 DNA repair and recombination proteins [BR:csk03400]
ES15_0021 (polA)
Enzymes [BR:csk01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ES15_0021 (polA)
DNA replication proteins [BR:csk03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ES15_0021 (polA)
DNA repair and recombination proteins [BR:csk03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ES15_0021 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ES15_0021 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
25878..28661
|
AA seq |
927 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAKEAAAAGRAVLISTGDKDMAQLVTPDVTLINTMTNTVLGPEEVCAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALYANPEKIAELSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELSHDRLEVQQPQADELLALFRQYEFKRWTSDVEAGKWLQSR
GKPAAKPTETIVVEAEPEEEAVALSSERYVTILDEETLQAWIERIKNAPVVAVDTETDSL
DNLTANLVGISFATEPGLAAYIPVAHDYLDAPDQLSRDRVLELLKPLLEDESLVKVGQNL
KFDRGILQNYGIELRGIAFDTMLESYILDSVSGRHDMDSLSSRWLKHTTITFEQIAGKGK
NQLTFNQIDLEQAGRYAAEDADVTLQLHLKMWPKLQQHKGPLNIFEHIEMPLVPVLSRIE
RNGVKIDPAVLHAHSQEIALKLTELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKPLKK
TPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPQMINPKTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK
GLLSAFAEGKDIHRATAAEVFGLPLESVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIPR
KESQKYMDLYFERYPGVLEYMERTRKQAKEQGYVETLDGRRLYLPDINASNAARRAGAER
AAINAPMQGTAADIIKRAMIAVDGWLQKEQPRVKMIMQVHDELVFEVHKDDVEAVSQKIH
ELMENSMQLDVPLLVEVGSGVNWDEAH |
NT seq |
2784 nt +upstreamnt +downstreamnt
atggttcagatcccagaaaatccccttattctcgtcgatggctcttcttacctgtatcgg
gcgtaccacgcgtttccgccgctcaccaacagtgccggcgagcccacgggcgcgatgtat
ggcgtgctgaatatgctgcgcagcctgatactgcagtaccagccgactcacgcggccgtg
gtgttcgacgcgaaaggcaaaaccttccgtgatgaactgttcgagcactacaaatctcac
cgcccgcccatgcctgacgatctgcgtgcgcaaatagagccactgcatgcgatggttaaa
gcgatgggcctgccgcttctggcggtctccggcgtggaagcggacgacgttatcggtacg
ctcgccaaagaagccgccgcggcgggccgcgcggtgcttatcagcaccggcgataaagac
atggcgcagctcgtcacgccagacgtcacgcttatcaacaccatgaccaataccgtgctg
gggccggaagaagtgtgcgcgaagtatggcgtgccgccggaacttatcatcgacttcctg
gcgctgatgggcgactcgtccgataacattcccggcgtgccgggcgtcggcgagaaaact
gctcaggcgctgctgcaggggcttggtggtctggacgcgctttacgccaacccggagaaa
atcgctgagctctccttccgcggtgctaaaaccatggcggcgaagcttgagcagaataaa
gaggtggcgtatctctcctatcagctggcgaccattaaaaccgatgtggagctggagctg
agccacgatcgtctggaggtgcagcaaccgcaggctgatgaattgctggcgctcttccgg
cagtacgaatttaagcgctggacatccgatgtcgaggcgggcaaatggctccagtcccgt
ggcaaacctgccgcgaagccaacagaaacgattgtcgttgaggccgagccggaagaagaa
gctgtagcgctctcgtcagagcgctacgtcactattcttgacgaagagacgcttcaggcg
tggatcgagcgcattaaaaacgcgccggtggtggctgtggataccgaaaccgacagcctc
gataacctgacggccaacctcgttggcatctctttcgccaccgagccaggccttgcggcg
tatatcccggtcgcgcatgattacctcgatgcgccggatcagctttcccgcgatcgcgtg
ctggaactattaaaaccgttgctggaagacgaatcgctggtgaaagtgggccagaacctg
aaattcgaccgcggcattttgcagaattacggcatcgaactgcgcggcatcgctttcgat
accatgctggagtcgtacattctggacagcgtctcaggccgccacgatatggacagcctc
tccagccgctggcttaaacacaccaccatcacgtttgagcagatcgccggtaaaggcaaa
aatcagcttacgtttaaccagatcgatctcgaacaggccgggcgctacgcggcggaagac
gccgatgtgacgctccagctgcacctgaagatgtggccaaaactgcagcagcataaaggc
ccgctgaatatctttgaacatattgagatgccgctggtgccggtgctgtcgcgcatcgag
cgcaacggcgtgaaaatcgatccggcagtgctgcacgcgcattcgcaggagattgccctt
aagctcaccgagcttgagcaaaaagcgcatgagatcgcgggcgagccgtttaatctctct
tccaccaaacagctgcagactattctgtttgaaaaacagggcatcaagccgctgaagaaa
acgccgggcggcgcgccgtcaacctcagaagaggtgctggaagagctggcgctcgactac
ccgctgccgaaagtcattctgcaataccgcggccttgcgaagctgaaatcgacttacacc
gacaaactgccgcagatgattaacccgaaaaccggccgcgtgcatacctcttaccatcag
gcagtcacggccaccgggcgtctgtcgtccaccgatccgaacctgcaaaacattccggtg
cgtaacgacgaaggccgccgtatccgccaggcgtttatcgcgccggaggattacgtcatt
gtctcggcggactactcgcagattgagctgcgtattatggcgcatctgtcacgcgataaa
gggctgctcagcgcgtttgcggaaggcaaagacatccaccgcgcaacggcggcggaagta
tttggcctgccgctcgagagcgtctctaacgaacagcgccgcagcgccaaagcgattaac
ttcggtcttatctacggcatgagcgcgttcggcctgtcgcgccagctcaatatcccgcgt
aaagagtcgcagaagtacatggatctctacttcgagcgttaccctggcgtgctggaatat
atggagcgcacccgtaagcaggcgaaagaacagggctatgtcgaaacgctggacgggcgt
cgtctctatctgccggatatcaacgccagcaacgcggcgcggcgtgcaggcgctgagcgt
gcggcgatcaatgccccgatgcagggaacggccgcagacatcatcaaacgtgccatgatc
gcggtcgatggctggctgcagaaagagcagccgcgcgtgaaaatgatcatgcaggtgcac
gatgaactggtgtttgaagtgcataaagatgacgtggaagccgtgtcgcagaaaatccat
gaactcatggagaacagcatgcagcttgacgtgccgttgctggtggaagtcggcagcggt
gtgaactgggatgaagcgcactga |