Cronobacter sakazakii ES15: ES15_0756
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Entry
ES15_0756 CDS
T02119
Symbol
recD
Name
(GenBank) putative exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csk
Cronobacter sakazakii ES15
Pathway
csk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ES15_0756 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csk03400
]
ES15_0756 (recD)
Enzymes [BR:
csk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ES15_0756 (recD)
DNA repair and recombination proteins [BR:
csk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ES15_0756 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
CbiA
DEAD
AAA
Tautomerase-like
SRP54
AAA_33
TrwB_AAD_bind
T2SSE
UvrD_C
MukB
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFJ98329
LinkDB
All DBs
Position
803519..805354
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AA seq
611 aa
AA seq
DB search
MKMHQLIQQAVVQKLLRPLDAQFAMMVASDDEPAVMLAASLVSRDAGEGHVCLPLSRLCA
THCFAGRHDEMAQTLFEAAGNPDDWRSLLLASPAVSEDDAPTPLKLIGERLYLNRMWRHE
RAVAAFFRERNHSIELEEARLSAVLEALFGPPGDEVDWQKVAAAVALTRRISVISGGPGT
GKTTTVAKLLAAMVQLSEEKLPRIRLAAPTGKAAARLTESLGAALRRLPLSDAQKNALPE
EASTLHRLLGAQPGSQRLRYHEGNPLHLDVLVVDEASMIDLPMMARLIAALPDHARVIFL
GDRDQLASVEAGAVLGDICHYVNHGFTTERATELARITGCHINGGEPHPAGALRDCLCLL
QKSYRFGSDSGIGQLAFAVNRSDHRAARATFSRGFDDIACKTLAGNDDYAQMIDETLAGY
ERFLTLVRERAEPEAILAAFSEFQMLCALREGPFGVAGLNERVEHALAQRRLIRRTPLSR
WYEGRPVMISRNDSALGLFNGDIGVALDRGDGLRVWFPMPGGKLKPVVPSRLPDNDTAWA
MTVHKSQGSEFDHAALLLPGQFAPVVTRELVYTAITRARRRLSLYADERVLEMAIATRTE
RRSGLMACFEQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatcaactgatccagcaggccgtagtgcaaaagcttctgcgcccgctggat
gcccagttcgcgatgatggtggcaagcgatgatgaaccggcggtgatgctcgccgcctcg
ctggtgagccgcgacgccggtgaaggccacgtctgtctgccgctctcccggctgtgtgcg
acgcactgcttcgccgggcgtcacgatgaaatggcgcaaacgctgtttgaggcggcgggc
aatccggacgactggcgctcgctgttactggcatcgcctgcggtgagtgaggacgacgcg
ccgacgccgctgaagctcatcggcgagcgtttgtatctgaaccgtatgtggcgtcatgag
agggcggtcgcggcgttctttcgcgagcgtaaccatagtattgaactggaagaagcgcgc
ctgagcgcggtactggaggcgctttttgggccaccaggcgatgaagtggactggcagaaa
gtggcggcggcagtcgcgctcacccggcgcatctcggtgatttccggcgggccgggcacc
gggaaaaccaccacggtggcgaaactgctggcggccatggtgcagctctcggaagagaaa
ctgccgcgtatccgccttgccgcgccgaccggtaaagccgcggcgcgcctgacggaatcg
ctcggtgctgcgctgcgtcgtttgccactgagcgacgcgcagaaaaacgcgctgccggaa
gaagccagcacgctgcaccgcctgctgggtgcgcagccgggcagccagcgtctgcgctac
cacgaaggtaacccgctgcatctggatgttctggtggtggatgaggcttcgatgatagac
ctgccgatgatggcgcggcttatcgcggcgctgccggaccatgcgcgggtgattttttta
ggcgatcgcgatcagctggcgtccgtggaagcgggcgcggtgctcggtgatatctgccac
tacgtgaaccacggttttaccactgaacgcgccaccgagcttgcccgcatcacggggtgt
cacattaacggcggcgagcctcatccggcaggcgcgctgcgcgactgcctgtgcctgctg
cagaaaagctatcgttttggcagcgattccggcatcggccagctcgcgtttgctgttaat
cgcagcgatcatcgcgccgccagagcgacgtttagccggggatttgacgatatcgcctgc
aaaacgctggcgggtaacgacgattacgcacagatgattgacgagacgctggcaggctac
gagcggttcttaacgctggtccgcgagcgtgccgagccggaggccattcttgcggccttc
agcgaattccagatgctctgcgcgctgcgtgaagggccgttcggcgtcgccgggcttaac
gagcgtgtggaacatgcgctggcgcagcggcggctgattcgtcgcacgccgctgtcgcgc
tggtatgaagggcggccggtgatgatttcgcgcaacgacagcgcgctggggctgtttaac
ggcgatatcggcgtggcgctggatcgtggcgatggcctgcgcgtctggttcccgatgccc
ggcggcaagctgaaacccgtcgtgccaagccgcttgccggataatgacaccgcgtgggca
atgacggtgcataaatcacagggttcggagttcgatcatgcggcgctgctcctgccgggg
cagttcgcgccggtggtcacgcgagagctggtctatacggcgattacgcgcgcgcggcga
cggttgtcgctgtatgcggatgagcgggtgctggagatggccatcgcgaccagaacggaa
cggcgcagcggcctgatggcctgctttgaacaataa
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