Cronobacter sakazakii ES15: ES15_1658
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Entry
ES15_1658 CDS
T02119
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
csk
Cronobacter sakazakii ES15
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csk03016
]
ES15_1658 (rnd)
Enzymes [BR:
csk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ES15_1658 (rnd)
Transfer RNA biogenesis [BR:
csk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ES15_1658 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DUF3253
Motif
Other DBs
NCBI-ProteinID:
AFJ99231
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All DBs
Position
1765533..1766654
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AA seq
373 aa
AA seq
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MNYQMITTNDALATLCETARTQRALALDTEFVRTRTYYPQLGLIQLYDGENVALIDPLTI
TDWAPFQALLQDQNVTKFLHAGSEDLEVFQNAFSMMPDPFIDTQVLASFVGHPLSCGFAT
LVEHHTGVVLDKSESRTDWLARPLTERQCDYAAADVWYLLPIAHKLMEQVREAGWLTAAI
NECRLMTQRRGEVLDPDEAWREITNAWQLRPRQLACLKLLAGWRLRKARERDMAVNFVVR
EENLWKVARHMPGSLGELDGMGLSGSEIRFHGKTLLALVAQAQALPEEALPEPLANLVDM
PGYRKVFKEIKALVQATSEAHKISAELMASRRQINQLLNWHWKLKPQNQLPELISGWRGE
LLNESLKTLLENY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagatgattaccaccaatgacgcgctggcgacgctgtgcgagaccgcacgc
acgcagcgcgccctggcgctggacaccgaatttgtccgtacccgtacttactacccacag
ctggggcttatccagctgtatgacggcgaaaacgtcgcgcttatcgatccgctgaccatt
accgactgggcgccgtttcaggcgctgttgcaggatcaaaacgtcaccaagtttctccac
gcgggcagcgaagatctggaagtgtttcagaacgcgttcagcatgatgcccgatccgttt
atcgacactcaggtgctggcttcgttcgttggccatccgctctcctgcggttttgcgacg
cttgtggaacatcacaccggcgtggtgctggataaaagcgagtcgcgcaccgactggctg
gcgcgtccgctgaccgagcgccagtgcgattacgcggcggcggatgtctggtatctgctg
ccgatcgcccacaaactgatggaacaggtgcgcgaagccggctggctgaccgccgccatt
aatgaatgccgtctgatgacccagcgccgcggcgaggtgctcgatcctgatgaagcctgg
cgtgaaatcaccaacgcctggcaactgcgtccgcgtcagcttgcgtgcctgaagctgctg
gcgggctggcgtctgcgcaaagcgcgcgagcgcgatatggcggtgaatttcgtggtgcgc
gaagaaaacctctggaaagtggcgcgccatatgccaggctcgcttggcgagcttgacggc
atggggctttccggcagtgaaatccgcttccacggcaagacgctgctggcgctggtcgcg
caggcgcaggcgctgccggaagaggcgctgccggagccgctcgcgaatctggtcgacatg
ccgggctatcgcaaggtatttaaagagatcaaagcgctggtgcaggcgacgagcgaggcg
cataagatcagcgccgagctgatggcctcacgccgccagattaaccagttgctgaactgg
cactggaagctgaaaccgcagaatcaattgccggaattaatcagcgggtggcgcggcgag
ctattaaatgaatcattaaaaacgctgctggaaaattattaa
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