Cronobacter sakazakii ES15: ES15_1816
Help
Entry
ES15_1816 CDS
T02119
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
csk
Cronobacter sakazakii ES15
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csk03016
]
ES15_1816 (rnb)
Enzymes [BR:
csk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ES15_1816 (rnb)
Transfer RNA biogenesis [BR:
csk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ES15_1816 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AFJ99389
LinkDB
All DBs
Position
complement(1934717..1936651)
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAVIHTEKEKESAEPEELIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRAERGVSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEREAPDGVAT
EMLDENLTREDLTALDFVTIDSASTEDMDDALYVEALDGDRLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLREGVQRRALVCRMIIEADGAISDDIHF
FAAIIESKAKLAYDDVSDWLEEKGDWQPGSEAIAAQIRLLQQICQRRSAWRTEHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHAGFD
PASTEQLATLLQSHGMHVDANDVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESATRPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgcttgcgcagcttaaacagcaactgcattcccagacgccg
cgcgccgaaggggtagtaaaagccacggaaaaaggttttggtttccttgaggttgacgcg
cagaaaagctacttcattccgccgccgcagatgaagaaagtgatgcacggcgatcgcgtc
attgccgttatccatacggaaaaggaaaaagaatccgccgagcccgaagagcttatcgaa
cccttcctgacccgctttgtgggccgggtgcaaaagaaagacgatcgtctctctatcgtt
cccgatcatccgctgctgaaagacgccatcccgtgccgcgctgaacgcggcgtcagccac
gatttccagaatggcgactgggcggtggcggaaatgcgccgccatccgctgaaaggcgat
cgcggtttctacgcggaactgacacagtttattaccttcggcgacgaccatttcgtgccg
tggtgggtgacgctggcacgccacaatcttgagcgcgaagcgccggacggcgtggcgacc
gaaatgctggatgaaaacctgacgcgtgaagatttaaccgcgctggatttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgtggaagcgctggatggcgac
cgcctgcaactgaccgtcgcgatcgccgacccgaccgcgtggatcgccgaaggcagcaag
ctcgacaacatcgctaaagtgcgcgcgttcaccaattacctgccgggctttaacatcccg
atgctgccgcgcgagctgtctgacgacctctgctcgctgcgcgaaggcgtgcagcgccgt
gcgctggtctgccgcatgattatcgaagccgatggcgccatcagcgatgacattcacttc
ttcgccgctatcatcgaatcgaaagccaagctggcctatgacgacgtttccgactggctg
gaagaaaaaggcgactggcagccgggcagcgaggcgattgccgcgcagatccgcctgctg
caacagatttgccagcgccgcagcgcctggcgtaccgaacacgcgctggtgtttaaagac
cgcccggattaccgctttgtgctgggcgagaaaggcgaagtgctggatatcgtcgccgag
ccgcgccgcatcgctaaccgtatcgttgaagaatcgatgatcgccgcgaacatctgcgcc
gcgcgcgtgctgcgcgacaagctcggcttcggcgtttacaacgtccacgcgggctttgac
ccggcgagcaccgaacagctggcgacgctgctgcaaagccacgggatgcatgtggatgcg
aacgacgtgctgacgctgccgggcttctgcaagcttcgccgcgagctggatgcccaaccg
tccggtttcctcgacagccgcattcgccgcttccagtcgtttgcggaaatcagcaccgag
ccaggcccgcacttcggcctcggccttgaagcctatgcgacctggacttcgccgattcgt
aaatatggcgatatggtcaaccaccgcctgctgaaagccatcattaagggcgaaagcgct
acgcgtccacaggatgaagccaccgtgcagatggccgagcgtcgtcgtcttaaccgcatg
gcggagcgcgatgtgggcgactggctgtatgcccgtttcctgaaagacaaagccggcacc
gatacccgcttcgcggcggaaattattgatgtcagccgcggcggcatgcgcgtgcgcctg
gtggataacggcgcggtcgcctttattcccgcaccgttcctgcacgcggtgcgcgatgag
ctggtctgcagccaggaaaacggcactgtgcagatcaaaggcgagaccgtttataaagtc
accgacgttatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtcatcgca
cgcccggtcgcctga
DBGET
integrated database retrieval system
