Cronobacter sakazakii ES15: ES15_3546
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Entry
ES15_3546 CDS
T02119
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
csk
Cronobacter sakazakii ES15
Pathway
csk02020
Two-component system
csk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ES15_3546 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ES15_3546 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csk03021
]
ES15_3546 (rpoN)
Transcription machinery [BR:
csk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ES15_3546 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6189
Motif
Other DBs
NCBI-ProteinID:
AFK01120
LinkDB
All DBs
Position
3836095..3837492
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AA seq
465 aa
AA seq
DB search
MTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQETQDSEGLDTAEALE
QKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSLQDYLMWQVELTPFS
DTDRAIATAIVDAVDDTGYLTVTVQDILDGMGDSDGDIGLEEIEAVLKRVQRFDPVGVAA
RDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRVTRLKEDVLKEAVNL
IQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLKINQQYAAMSGSARN
ESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQ
AVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAEN
PAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcagttgcagcaggccatccgcttgttgcaattgtccacgctggagcttcag
caggagctgcaacaggcgctggagagtaatcccctgcttgaacaaaccgacattcacgac
gaaattgccactcaggaaacgcaggacagcgaagggctggacaccgccgaagcgctggag
caaaaagagatgccagacgagctgccgcttgacgccagctgggacgaaatctacaccgcg
ggtacgccttcaggcaccggtaccgactatatcgacgacgaactgcccgtttatcagggc
gaaaccacccagagcctgcaggattacctgatgtggcaggtggagctgacgccgttttcc
gataccgatcgcgccatcgccacggcgatcgtcgacgcggtagatgataccggctacctc
accgtgacggtgcaggatattctcgacggcatgggcgacagcgatggtgatatcggcctt
gaagagatcgaagccgtgcttaagcgcgttcagcgtttcgatccggtcggcgtcgccgcc
cgggatctgcgcgactgcctgctgatccagctttcgcagtttagcgccgaaacgcctttt
cttgcccaggcgcgccagatagtcagcgatcacctcgacctgctggccaaccatgatttc
cgcagcctgatgcgcgttacgcgccttaaagaagatgtgctcaaagaagcggtcaatctg
atccagtcgctcgatccgcgccccggccagtcgatccagaccggcgagccggaatatgtt
attcccgatgtgctggtgcgcaagcataacggccgctggacggtcgagcttaacgccgac
agcattccccggcttaaaatcaatcagcagtacgctgccatgtccggcagcgcgcgcaat
gaatccgacagccagttcatccgcagcaacctccaggaagctaaatggcttatcaaaagc
ctggagagtcgtaacgacacgctgttgcgcgtcagccgctgtatcgtcgaacagcaacag
gcgttctttgagcagggcgaagagtatatgaagccgatggtgctggcggatatcgcgcag
gcggtcgagatgcatgaatcgaccatctcccgcgtcaccacgcaaaaatatctgcacagc
ccgcgcggcatctttgaattaaagtattttttctcaagccacgtgaacaccgagggcggc
ggcgaagcctcttccacggctatccgcgcgctggtgaaaaagttgattgcagcggagaac
cccgcgaaacccttaagcgacagcaagctaacgtctatgctgtcagaacaggggatcatg
gtggcccgccgtaccgttgcgaagtatcgagaatctttatccataccgccgtcaaaccag
cgcaaacagctggtctga
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