Cronobacter sakazakii ES15: ES15_3676
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Entry
ES15_3676 CDS
T02119
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csk
Cronobacter sakazakii ES15
Pathway
csk03420
Nucleotide excision repair
csk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ES15_3676 (uvrD)
03430 Mismatch repair
ES15_3676 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csk03400
]
ES15_3676 (uvrD)
Enzymes [BR:
csk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ES15_3676 (uvrD)
DNA repair and recombination proteins [BR:
csk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ES15_3676 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ES15_3676 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFK01250
LinkDB
All DBs
Position
complement(3992225..3994387)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDDGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQACRQLLQEKALAGRAASALQRFLELIEALAHETIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASVSRPVSHKQLG
APIAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcgggcgcgggcagcggaaagacgcgcgtgctggtg
catcgtatcgcctggctgatgatggtagaaaactgttcgccgtactccatcatggcggtg
acttttaccaacaaagcggcggcggagatgcgccaccgtatcggccaactgatgggcacc
agccagggcggcatgtgggtcggcacgttccacggtctcgcccatcgcctgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagcgaagatcagctg
cgcctgctcaagcgtctcatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggcaaaaaagatgacggcctgcgtccgcaccatattcag
agctacggcaacccggtagagcagacctggcagaaggtgtatcaggcgtatcaggaagcc
tgcgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgcccatgagctgtgg
ctcaacaaaccgcatatcctcaatcactaccgcgagcgcttcaccaatattctggtggat
gagttccaggacaccaacggcattcagtacgcctggatccgcctgctggcgggcgacacg
ggcaaagtgatgatcgtgggtgacgatgaccagtcgatttacggctggcgcggcgcgcag
gtggagaatattcagcgcttcctgaatgactttccgggcgcgcagaccattcgtctcgaa
caaaactaccgctccaccaacaatattcttaacgccgcgaacgccctgatcgccaataac
gccgggcgtcttggtaaagagctgtggaccgacggcagcgacggcgagcctatctctctc
tactgcgcgttcaacgagctggatgaagcgcgctttgtggtcaaccgcatcaaggtgtgg
caggagaacggcggcgcgttgcaggattgcgccattctctatcgcagtaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggcgagcatgccgtatcgcatctatggcggaatg
cgattcttcgaacgccaggagatcaaagacgcgctctcttatctgcgtcttatcgccaac
cgtaacgacgacgcagcctttgagcgcgtggtgaatacgccgacgcgcggcatcggcgac
cgcacgctggatgtcgtgcgccagaccgcgcgagaccgccaactgacgctctggcaggcg
tgccgccagctgttgcaggagaaagccctggccggccgcgctgccagcgctttgcagcgt
ttccttgagcttatcgaagcgctggcgcatgaaaccatcgatatgccgctgcacgtgcag
actgacagggtaattaaagattccggcctgtggctgatgtacgagcaggaaaaaggcgaa
aagggccaggcgcgtatcgaaaacttagaagaactggtgacggcgacgcgccagttcagc
tacaacgaagaagacgaagatctgatgccgttgcaggcgtttttgtcccacgcggcgctg
gaagcgggcgaagggcaggccgacgcctggcaggacgcggtgcagctgatgacgctgcac
tccgccaaagggctggaattcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccaagccagatgtcgctcgatgaaggcgggcgtctggaagaggagcgacgcctggcctat
gtgggcgttacccgcgccatgcagaagctgacgctcacctatgcggaaacccgtcgactg
tacggcaaagaggcgtatcaccgtccgtcgcggtttatcgctgagttgccggaaggctgt
gtggaagaagtgcgcctgcgcgcgagcgtgagccgtccggtcagccataagcagctgggc
gcgccgatagcgcagaacgactccggttataagcttggccagcgcgtgcgccacccgaaa
ttcggtgaaggcaccatcgtgaatctcgaaggcagcggcgaacacagccggttgcaggtg
gcgttcaacggtcagggcattaaatggctggtggccgcttacgcgcgcctcgaaaccgtc
tga
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