KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_11010
Entry
COCSUDRAFT_11010  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11293  protein HIRA/HIR1
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_11010
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     COCSUDRAFT_11010
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 Beta-prop_Vps41 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 17045427
NCBI-ProteinID: XP_005651956
JGI: 11010
UniProt: I0Z9U3
LinkDB
AA seq 891 aa
MLVDKPAWVEHGGSPIFSIDVHPSGKRFVTAGSDHKTKLWNLLPVLEEKNKQCPRLLATL
TDHYGPVNVARFSRNGRFLATGSDDKLTCLYELRPGAGHSSFGSSDGPNVENWKHFITLR
GHSNNVTDLAWSNDDTYLATCSLDNSIIIWNPLNGQQVTTLHGHESYVKGVAWDPIGKYL
ASQSDDKTMRLWRVEDWAAVATVSEPFRKGWVSNTFSLRLGWSPDGQHLTAVNSYQSPCH
TVALLDRRTWKYDFSMVGHNGAIVKASYNPRIFRSLEGGTEGTCVALGSQDTKLSIWLSS
AKRPTFVAQKLFLQSVVDLSWTPDGYCLLACSSDGTVAALQFEAKELGAPLKQAEVDGML
KTLYGSSESKATLFAESAAQLQLEAAATNGHAATPPTGDAAARPHQPLVGLAARMQPAGG
IPSGVGPSATALQTQARQMNGQRRVPPMSLQPSGNGTVPTRIAPQPPQAQPQSASAQPPQ
APGRPAQGLTTPAGAVGTKRRAAEGGAPTSKRLVAERVDGRPFASQAAAFESPGRAARPL
LSLPAAEALVSQQLHARDQSELAPVGQAPGRVMLEAANDLASGADRATADVVCSCSGKQV
WADRLSGCVVRLAGSQNYAAVGLRDGTVQVYSPAGRRLLPAMQLGSAPMFLVSDGGWRLL
AVSQSGSLHLWDLKDQRLIVEASIDSLLRSVAPHANRGSGVCTVVSVRLSTAGLPLAVLS
NSTAYALHLGMKTWMRVADSNFSFSSYMSLYSAGASSAGMEAALVPVRCGYHTIYIRYRY
APLMCVDRGHLEANMAAALLLQSPQEYRRWLLTYVRHLAGDAEEGRLRELCEGLLGPLRR
SGEGTDQDDAPRALGLDTRKLLRDDVLREVSRNRTHQRLVGEFQELLSEID
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgcttgtggacaagcctgcatgggtggagcatggaggttctccaatcttctcaattgac
gttcatccgtcagggaagcgtttcgtgacagctggttccgaccacaagacaaaattgtgg
aacttgctgcctgtgctggaggagaagaacaagcagtgtccacgcttgctggccaccctg
acagaccactatgggcccgtgaatgtggcaagattttcgaggaacggacgcttcttggcc
acaggatccgatgacaagctcacctgcctgtacgagttgcgccctggagctgggcactcc
agctttggcagcagtgatgggccgaatgtggagaactggaagcacttcatcacgctgcgc
ggccacagcaataacgtcacagacttggcctggtcgaacgatgacacgtacttggccacc
tgcagcctggacaacagcatcatcatttggaaccccttgaacggccaacaggtcaccacg
ctgcatgggcacgagagctatgtgaagggggtggcctgggaccccatcggcaagtacctg
gccagccagtcagacgacaaaacgatgcggctgtggcgggtggaggactgggcggcggtg
gcgacagtgtcagagcccttccgcaaggggtgggtgagcaacaccttctcgctgcgcctg
ggctggtcgccggatgggcagcacctcacagcagtcaactcgtaccagtcgccctgccac
accgtggcgctgctggacaggcgcacctggaagtacgacttctccatggtcggccacaat
ggagccattgtcaaggcgtcctacaaccccaggatcttccgctctctcgagggtggcact
gagggcacctgcgtggcgctgggcagccaggacacaaagctgagcatctggctgtccagt
gcgaagcgcccaacttttgtcgctcagaagctgtttttgcagagcgtggtggacctgtcg
tggacacctgacgggtattgcctgctggcttgctccagtgacggcaccgtggcggcgctt
caattcgaggccaaggaattgggagcgcctctcaagcaggcggaggtggatgggatgctg
aagacgctgtacggctcttccgaatcaaaggcgacactctttgcagagagcgcagcccaa
ctgcaactggaagctgcggccaccaatgggcacgcggcgacgcctcccacaggcgatgca
gccgccagaccacaccagcctcttgtagggctggcagctcgaatgcagccggcggggggc
atcccttcaggagtcggcccttcagcgacagcgctgcagacacaggctcggcagatgaac
gggcagcggcgagtcccgcccatgtcactgcagccctctggcaacgggaccgtgcccacc
cgcatcgcaccgcagccgccgcaagcgcaaccgcagtcagccagcgcgcagccgccgcaa
gcccccggcaggccagcgcaagggctcacaacccccgccggagctgtgggcaccaagcgg
agagctgcagagggaggagcgcccaccagcaagcggctggtggcagaaagggtcgatggg
cggccgtttgcctcgcaggcggccgcgtttgagtcaccgggcagggcggccaggccgctg
ctgagcctgccggcggcggaggcgctggtgtcgcagcagctgcatgccagggaccagtca
gagctggcgcctgtcggccaggcgccagggcgcgtcatgctggaggcggcaaatgatctg
gcgagcggggcagaccgcgccacggcggatgtggtgtgctcctgcagcgggaagcaggtg
tgggccgaccgcctgagtggttgcgtggtgcgcctggccggcagccagaactatgcagcc
gtcgggctgcgtgatggaactgtgcaggtgtacagcccggcaggacggcggctgctgcca
gcaatgcagctaggatctgcgccgatgtttctggtgtcggatggcggctggaggctactg
gctgtcagccagtcaggctccctgcacctgtgggacctgaaggaccagcggctcattgta
gaggcctcaatagattctttactgcgatccgttgccccacacgccaacagggggagtggt
gtgtgtacagtggtgtccgtccggttgtcaacggctggacttccgctggcggtgttgtca
aacagcacggcatacgcactgcacctgggtatgaaaacatggatgcgcgtggcggacagc
aacttctccttctcatcttacatgtccctctactccgccggcgcatcctccgcaggtatg
gaggctgcacttgtccctgtacgctgcggatatcatacgatatatatccgatatagatat
gcacccctgatgtgtgtcgatcgcgggcatctggaggccaacatggcggccgcacttctg
ctgcagtccccgcaggagtaccgccgctggctcctcacctatgttcgccacctggccggg
gatgctgaggagggccgcttgcgcgagctgtgtgaggggctgctgggaccgctcaggcgc
agtggagagggaacggatcaggacgatgcgccccgagcgctggggctggacacaaggaag
ctcctccgtgatgatgtgctgcgagaagtgtccaggaatcgcacgcatcagcgccttgtg
ggcgagtttcaggagctgctcagtgaaatcgattga

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