Coccomyxa subellipsoidea: COCSUDRAFT_11010
Help
Entry
COCSUDRAFT_11010 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_11010
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
COCSUDRAFT_11010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
17045427
NCBI-ProteinID:
XP_005651956
JGI:
11010
UniProt:
I0Z9U3
LinkDB
All DBs
AA seq
891 aa
AA seq
DB search
MLVDKPAWVEHGGSPIFSIDVHPSGKRFVTAGSDHKTKLWNLLPVLEEKNKQCPRLLATL
TDHYGPVNVARFSRNGRFLATGSDDKLTCLYELRPGAGHSSFGSSDGPNVENWKHFITLR
GHSNNVTDLAWSNDDTYLATCSLDNSIIIWNPLNGQQVTTLHGHESYVKGVAWDPIGKYL
ASQSDDKTMRLWRVEDWAAVATVSEPFRKGWVSNTFSLRLGWSPDGQHLTAVNSYQSPCH
TVALLDRRTWKYDFSMVGHNGAIVKASYNPRIFRSLEGGTEGTCVALGSQDTKLSIWLSS
AKRPTFVAQKLFLQSVVDLSWTPDGYCLLACSSDGTVAALQFEAKELGAPLKQAEVDGML
KTLYGSSESKATLFAESAAQLQLEAAATNGHAATPPTGDAAARPHQPLVGLAARMQPAGG
IPSGVGPSATALQTQARQMNGQRRVPPMSLQPSGNGTVPTRIAPQPPQAQPQSASAQPPQ
APGRPAQGLTTPAGAVGTKRRAAEGGAPTSKRLVAERVDGRPFASQAAAFESPGRAARPL
LSLPAAEALVSQQLHARDQSELAPVGQAPGRVMLEAANDLASGADRATADVVCSCSGKQV
WADRLSGCVVRLAGSQNYAAVGLRDGTVQVYSPAGRRLLPAMQLGSAPMFLVSDGGWRLL
AVSQSGSLHLWDLKDQRLIVEASIDSLLRSVAPHANRGSGVCTVVSVRLSTAGLPLAVLS
NSTAYALHLGMKTWMRVADSNFSFSSYMSLYSAGASSAGMEAALVPVRCGYHTIYIRYRY
APLMCVDRGHLEANMAAALLLQSPQEYRRWLLTYVRHLAGDAEEGRLRELCEGLLGPLRR
SGEGTDQDDAPRALGLDTRKLLRDDVLREVSRNRTHQRLVGEFQELLSEID
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggacaagcctgcatgggtggagcatggaggttctccaatcttctcaattgac
gttcatccgtcagggaagcgtttcgtgacagctggttccgaccacaagacaaaattgtgg
aacttgctgcctgtgctggaggagaagaacaagcagtgtccacgcttgctggccaccctg
acagaccactatgggcccgtgaatgtggcaagattttcgaggaacggacgcttcttggcc
acaggatccgatgacaagctcacctgcctgtacgagttgcgccctggagctgggcactcc
agctttggcagcagtgatgggccgaatgtggagaactggaagcacttcatcacgctgcgc
ggccacagcaataacgtcacagacttggcctggtcgaacgatgacacgtacttggccacc
tgcagcctggacaacagcatcatcatttggaaccccttgaacggccaacaggtcaccacg
ctgcatgggcacgagagctatgtgaagggggtggcctgggaccccatcggcaagtacctg
gccagccagtcagacgacaaaacgatgcggctgtggcgggtggaggactgggcggcggtg
gcgacagtgtcagagcccttccgcaaggggtgggtgagcaacaccttctcgctgcgcctg
ggctggtcgccggatgggcagcacctcacagcagtcaactcgtaccagtcgccctgccac
accgtggcgctgctggacaggcgcacctggaagtacgacttctccatggtcggccacaat
ggagccattgtcaaggcgtcctacaaccccaggatcttccgctctctcgagggtggcact
gagggcacctgcgtggcgctgggcagccaggacacaaagctgagcatctggctgtccagt
gcgaagcgcccaacttttgtcgctcagaagctgtttttgcagagcgtggtggacctgtcg
tggacacctgacgggtattgcctgctggcttgctccagtgacggcaccgtggcggcgctt
caattcgaggccaaggaattgggagcgcctctcaagcaggcggaggtggatgggatgctg
aagacgctgtacggctcttccgaatcaaaggcgacactctttgcagagagcgcagcccaa
ctgcaactggaagctgcggccaccaatgggcacgcggcgacgcctcccacaggcgatgca
gccgccagaccacaccagcctcttgtagggctggcagctcgaatgcagccggcggggggc
atcccttcaggagtcggcccttcagcgacagcgctgcagacacaggctcggcagatgaac
gggcagcggcgagtcccgcccatgtcactgcagccctctggcaacgggaccgtgcccacc
cgcatcgcaccgcagccgccgcaagcgcaaccgcagtcagccagcgcgcagccgccgcaa
gcccccggcaggccagcgcaagggctcacaacccccgccggagctgtgggcaccaagcgg
agagctgcagagggaggagcgcccaccagcaagcggctggtggcagaaagggtcgatggg
cggccgtttgcctcgcaggcggccgcgtttgagtcaccgggcagggcggccaggccgctg
ctgagcctgccggcggcggaggcgctggtgtcgcagcagctgcatgccagggaccagtca
gagctggcgcctgtcggccaggcgccagggcgcgtcatgctggaggcggcaaatgatctg
gcgagcggggcagaccgcgccacggcggatgtggtgtgctcctgcagcgggaagcaggtg
tgggccgaccgcctgagtggttgcgtggtgcgcctggccggcagccagaactatgcagcc
gtcgggctgcgtgatggaactgtgcaggtgtacagcccggcaggacggcggctgctgcca
gcaatgcagctaggatctgcgccgatgtttctggtgtcggatggcggctggaggctactg
gctgtcagccagtcaggctccctgcacctgtgggacctgaaggaccagcggctcattgta
gaggcctcaatagattctttactgcgatccgttgccccacacgccaacagggggagtggt
gtgtgtacagtggtgtccgtccggttgtcaacggctggacttccgctggcggtgttgtca
aacagcacggcatacgcactgcacctgggtatgaaaacatggatgcgcgtggcggacagc
aacttctccttctcatcttacatgtccctctactccgccggcgcatcctccgcaggtatg
gaggctgcacttgtccctgtacgctgcggatatcatacgatatatatccgatatagatat
gcacccctgatgtgtgtcgatcgcgggcatctggaggccaacatggcggccgcacttctg
ctgcagtccccgcaggagtaccgccgctggctcctcacctatgttcgccacctggccggg
gatgctgaggagggccgcttgcgcgagctgtgtgaggggctgctgggaccgctcaggcgc
agtggagagggaacggatcaggacgatgcgccccgagcgctggggctggacacaaggaag
ctcctccgtgatgatgtgctgcgagaagtgtccaggaatcgcacgcatcagcgccttgtg
ggcgagtttcaggagctgctcagtgaaatcgattga
DBGET
integrated database retrieval system