Coccomyxa subellipsoidea: COCSUDRAFT_11034
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Entry
COCSUDRAFT_11034 CDS
T02914
Name
(RefSeq) ARM repeat-containing protein
KO
K20224
importin-9
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_11034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_11034
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
COCSUDRAFT_11034
Pre-60S particles
COCSUDRAFT_11034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IPO11
IBN_N
HEAT_IPO9_c
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
17045262
NCBI-ProteinID:
XP_005651791
JGI:
11034
UniProt:
I0Z9C8
LinkDB
All DBs
AA seq
938 aa
AA seq
DB search
MEDQSSQIGRVLSAALDANPEVRQKGEALIKSLSLHPGFGHALVQASLRQEFPIGLRQMA
AVLLKQFIKAHWTPEAKHFEEPVVGDEEKAAIRRDLVAGLGDSDSRMRAAVGMAVAGIAK
WDVPAAWPQLLGQLVTVISERKDQRAVHGAVRCLSMFVDELEDKQVLQATLFPALLAIVN
SPSEYGASVRRRALQIVHSMAVMLAGVQSSADKESSKAIGALLDAWFQPFCVMLSQPTTA
HDVGGWGVKLEVLRLLVALTTNWRRVVQPHMPALLQHCWTLMHSCFPIYLTAVVLHQDDI
DEGLADSDGDVVEFEVLISQMFEFILTLVGNSKFLPLLEPVLPELAYMTIGYMQMTTDQE
ENWAEDPNVYVADEEDDIFSVRTSGELVLEEVLRQADGAAGTLAGAVRRRLDEAAAAQAA
GDAGWWRLREAALLAVGAVSDALLEAPGASDADFDLGSFLQNVLAQDLQAPDPPPFLVGR
ALWVASRLAPALGGERLVQYLQAAVDVLKSSSFGAVQVGACRAIVSLVPRAPAPALQPLL
DPIYEGTAPSSPCETLHMVLEALAAVVGADGGAGARWEPRLSPAVLQLWAQHVKDPLLSM
DAVAVIEGLASIPAALPSLQERALPHLVGILGAPEAGNPTLTEGALDVTCALLRPAAPEQ
AARVHSAASGTVMALVLRADDPGILQSASEILVRIGGEDLLSWGGADPAQTLHALLQAVA
RLLHPDVGDSPSLGVGEVISTMLRKMPGRLAGAMPEVLAAVVAKLAAAQSSPLITSLLIV
LAQLAHADARQLLDFLASQPAPGISAGNALEMVMRIWTERQIELRGVYEINLTSTALAAL
LASGHPALAEAKARRTHPGTNLHGAIRTRSRAATQAEQWQVVSARVKIFALLADMLIEAR
EGAHVRHSLLNFGFGTACPTVHLFPAGIFMVLYPCEGP
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagtcgtctcaaatagggcgtgtgctcagtgcagcgctcgatgcaaatcca
gaagtccgtcagaaaggagaagctctcatcaagtcgttgtcactgcaccctggtttcggc
catgcgcttgtccaagcgtccctacgacaggaatttcccatcggtttgcgccagatggca
gccgtgttgctgaagcaattcatcaaagctcactggacgccagaagccaagcactttgag
gagccagtggtgggggatgaagagaaggcagccatcaggcgagacctggtggcaggattg
ggggactctgacagccggatgagggctgcagtgggcatggcagtagcaggcatcgcaaag
tgggacgttcccgcagcctggccgcagttactaggtcagctggtcacggtgatcagcgag
cggaaggaccagcgcgctgtgcatggtgctgtaaggtgcctgtcgatgtttgtggacgag
ctagaagacaagcaggtcctgcaggcgacgctgttccctgccctgcttgcgattgttaat
agcccgtcagagtatggggccagcgtgcggaggcgtgccctccagatagtgcacagcatg
gcagtcatgctggcgggtgtgcagagtagcgctgacaaggagagcagcaaggcaatcggc
gccctgctggacgcctggttccaacccttctgcgtcatgctcagccagcccaccaccgcg
catgatgtgggcggttggggagtgaagctggaggttctgcggctgctggttgcgctgacc
acgaactggcgcagggtggtgcaaccgcacatgcccgcgctgctgcagcactgctggact
ctgatgcacagctgcttccccatctacctcactgctgttgtcctgcaccaggatgatatc
gatgaaggcctggcagactcagatggggatgtggtggagtttgaggtgctcatttcacag
atgttcgaattcatactcacgctcgtgggcaacagcaagttcctgccgctgctggaaccc
gtgctgccagagctggcctacatgacaataggctacatgcagatgacgacggaccaggag
gagaactgggcagaggaccccaatgtctacgtggcggacgaggaagatgacatcttcagc
gtgcgcaccagcggcgagcttgtgttggaggaggttctgcgccaggcagacggggcggct
gggacgctcgccggtgccgtgcggcggcggctggacgaggccgccgcggcccaggcggcg
ggcgatgccgggtggtggcggctgcgagaggcggcgctgctggcggtgggggcggtgtcg
gatgcgctgctggaggccccaggagccagcgacgccgactttgacctgggcagcttcctg
cagaacgtgctcgcgcaggacctgcaggcgcccgacccaccgcccttcctcgtcggccgc
gccctctgggtcgcctcccgcctggccccagcgcttggaggggagcggctggtgcagtac
ctgcaggcggctgtggacgttctgaagagcagcagctttggagcggtgcaggtcggcgca
tgtcgagccatcgtgtcactggtgccccgggcgcccgcgccggcgctgcagccgctgcta
gatcccatttatgaaggcacggctccttcctctccctgcgagacgctgcacatggtgctg
gaggcgctggcggccgtggtgggcgcggacgggggcgcgggcgcgcggtgggagccgcgc
ctgtcaccagccgtgctgcagctgtgggcgcagcacgtcaaggatcccctgctgtccatg
gacgccgtcgccgtcatcgagggccttgcctccatccccgccgccctccccagcctccag
gagcgggcgctgccgcacctggtgggcattctgggcgcgccggaggcgggcaacccgacg
ctaacagagggcgcgctcgacgtcacctgcgcgctgctacggccggccgcgcccgagcag
gcggcgcgcgtgcactcggccgcgtccgggaccgtcatggcgctcgtgctgcgcgcagac
gaccctggcattctgcagtccgcctccgagatcttggtgcgtatcggcggtgaggacctg
ttgagctggggcggcgcggatcccgcgcagacgctgcacgcgctgctacaggccgtcgcg
cggctgctgcacccggacgtcggcgactcaccctccctcggtgttggagaggtgataagc
acgatgctgcgcaagatgccggggcggctggcgggcgcgatgccggaggtgctggcggct
gtcgtagccaagctggcggccgcacaatcgtcgccgctcatcacctcgctgctcatcgtc
ctcgcgcagctcgcccacgccgacgcgcgccagctcctcgacttcctcgcctcccagcca
gctcccggtatatctgcagggaacgcgctggagatggtgatgcgcatttggacggagcgc
cagatagagctgcgcggcgtgtacgagatcaacctcacctccaccgccctggctgccctc
ctcgcctcaggccaccctgccctggccgaagccaaggcgcgccggactcatcctggcacc
aaccttcatggcgccatccggacgcggtcgcgcgcggcgacgcaggcggagcagtggcag
gtcgtcagcgcgcgagtcaagatcttcgctctgctggccgacatgctcatagaagcccgg
gaaggtgcgcatgtccgtcacagcctgcttaactttggttttggcacagcatgccccaca
gtgcatctcttcccagctggcattttcatggtactttacccctgcgaaggcccatga
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