Coccomyxa subellipsoidea: COCSUDRAFT_11115
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Entry
COCSUDRAFT_11115 CDS
T02914
Name
(RefSeq) TIP49-domain-containing protein
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSUDRAFT_11115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_11115
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csl03037
]
COCSUDRAFT_11115
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
COCSUDRAFT_11115
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
COCSUDRAFT_11115
Chromatin remodeling factors
SRCAP complex
COCSUDRAFT_11115
INO80 complex
COCSUDRAFT_11115
INO80 complex (yeast)
COCSUDRAFT_11115
SWR1 complex
COCSUDRAFT_11115
ASTRA complex
COCSUDRAFT_11115
Cilium and associated proteins [BR:
csl03037
]
Motile cilia and associated proteins
Dynein assembly factors
COCSUDRAFT_11115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
AAA_5
AAA_22
RuvB_N
AAA_16
AAA_19
Mg_chelatase
AAA_7
AAA_25
TsaE
Zeta_toxin
nSTAND3
NACHT
ResIII
Cdc6_lid
SLFN-g3_helicase
AAA_17
bpMoxR
Motif
Other DBs
NCBI-GeneID:
17045061
NCBI-ProteinID:
XP_005651592
JGI:
11115
UniProt:
I0Z8S9
LinkDB
All DBs
AA seq
468 aa
AA seq
DB search
MAGEVRVSGEVRDLTRVERIGAHSHIRGLGLDDALEARKVSQGMVGQVQARRAAGVILQM
IREGRIAGRGVLLAGQPGTGKTAIAMGMAKALGEETPFAMMAASEIFSLEMSKTEALTQA
FRKAIGVRIKEETEIIEGEVVEIEIDRPATGSVSKTGKLTMKTTEMETIYDLGSKMIEAL
TKQKVQSGDVIAIDKASGKITRLGRSFARSRDYDAMGPTTKFVQCPEGELQKRKEVVHVV
TLHEIDVINSRTQGFLALFAGDTGEIRSEVREQIDSKIAEWREEGKADIIPGVLFIDEVH
MLDVECFSFLNRALENDLAPILVVATNRGITKIRGTNYRSPHGIPIDLLDRLLIISTQPY
TEKELHTILEIRAEEEDVEMTEDAKDLLTKIGAETSLRYAIYLITAASLVATKRKAAAVE
VEDIGRAYTLFVDVKRSAQFMMEYQEQFMFNEVPEMEPAEADGAAMEQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctggggaggtgagagttagcggggaagtcagagatcttactagagtagagcgcatt
ggagcacactcgcacatccgaggcctgggacttgacgatgctttggaggcaaggaaggtg
tcccagggcatggtgggccaagtccaagcccgaagggcagcgggggtgatcttgcagatg
atcagggagggcaggatagctggcaggggggtgctgctggcagggcagcctggaacagga
aagaccgccattgcgatgggtatggcaaaggctttgggggaggagacacccttcgccatg
atggctgcatctgagatcttctccctggagatgtcaaagacagaggcgctcacccaggct
ttcagaaaagccatcggtgtgcggataaaagaggagacggagatcatcgagggggaggtg
gtggaaattgagatcgatcggcctgcaactgggagcgtctcaaaaacggggaagctcaca
atgaagacgacagagatggagaccatctacgacctgggctcaaagatgatcgaggcactg
accaagcaaaaggtgcagtcgggcgatgtcatcgccattgacaaagcctccggcaagatc
accaggctgggccgctcctttgcgcgctccagggactatgatgctatgggcccgacgaca
aagtttgtgcagtgcccagagggggagctgcagaagcggaaggaggtggtgcatgtggtc
acactgcacgagattgacgtcatcaactcgcgcacacaggggttcctggcactgtttgcg
ggggacaccggggagatacggtccgaggtacgcgagcagatcgactccaagatcgcagag
tggcgggaggaaggcaaggctgacatcatccccggcgtcctcttcatagatgaggtgcac
atgctggacgtggaatgcttcagtttcctgaaccgggcgctggagaatgatctggcgccc
atcctggtggtggccacaaaccgtggtatcaccaagatccgcggcacaaattaccggtca
ccccatgggatccccattgacttgctggatcggctgctcatcatttccacgcagccttac
acagagaaggagctgcacaccatccttgagatccgtgccgaggaagaagatgtggaaatg
acagaggatgcgaaggatctgctgaccaagattggcgcggagacttccctgcgctatgcc
atctacctcatcacagctgcctccctcgttgccaccaagcgcaaagcagcggctgtagag
gtggaggacattggccgagcatatacactgtttgtggatgtcaagcgaagcgcgcagttc
atgatggagtaccaggagcagttcatgttcaatgaggtccccgagatggagcctgcagag
gctgacggggctgccatggagcaatga
DBGET
integrated database retrieval system
