Coccomyxa subellipsoidea: COCSUDRAFT_11397
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Entry
COCSUDRAFT_11397 CDS
T02914
Name
(RefSeq) Thiamin diphosphate-binding protein
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00130
Ubiquinone and other terpenoid-quinone biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
csl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
COCSUDRAFT_11397
Enzymes [BR:
csl01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
COCSUDRAFT_11397
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
COCSUDRAFT_11397
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
COCSUDRAFT_11397
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
COCSUDRAFT_11397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
Peptidase_M13
MenC_N
Motif
Other DBs
NCBI-GeneID:
17045194
NCBI-ProteinID:
XP_005651723
JGI:
11397
UniProt:
I0Z960
LinkDB
All DBs
AA seq
798 aa
AA seq
DB search
LLRQPLPLVDTPNINLLWARLMIEELCRLGASTFCIAPGMPQTLINLFTPRARIVPCIDE
RSLAFWALGYGQATGEPAVVITSSGTAVANLLPAVVEASHSGVPLLLLTADRPGELRDTG
ANQTIDQARPCHPCCVMCAQVKIFGGYTRWAADVPAPDAAMPARMALTTVDAAYRHATGD
GPGPVHLNLQFREPLAPSQTPWPSSALQACSPLAQGLERWEGSGQPFTAPVVLAGAQRGL
LVVAQMGHPEDCLAALKIARSLGWPVVADVLSGAPAVSCSGTALDFAGTSFDSQHKVLML
LKCTSLACRCAVNAGLRVGASGRSDVALVHHFDHLLLDKDALWPALRPDVVLQLGGRLVS
KRAAQFLEWAAQPCLEEGRPAAKWMFAADAAQRHDASHLLSHHIQMPLPALATLAYWKAL
LQVQSAEKGTDVTLDDIHVESAVGGCMDRSGGYSELVRTLDGCAAAEINAALEELQPLTE
PHVARELSKVLPTGTGLFLGNSMPIRDMDMYAAPSDRQDNPSQQGSVTSSGIGAAVAANR
GASGIDGVMSAAAGFAYGLSRGATLVVGDISFLHDVNGLNLLRTGEMRPPLTVVLINNAG
GGIFSFLPIADQLPPDTFSQLWATPQNVDLAGMCRAHGIAHQRVTERVDLRKALQAAWAL
NKHSVVEVITKRDSNVGHHRSIQERVRQSLLRALRTVSAPAGALHMPLPTHSCAFGISKS
NLITLEHFYPSGSLLAKELRVTAASYRRYGLPLLKPLTTDFDRKLRGGFLLQISVESDNG
VHFTGIGEIAPLPGAASS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ctgctgaggcagcccttgccgcttgtggatacgccgaatatcaaccttctctgggctcgc
ctcatgattgaggagctttgccgcctgggggcctccaccttctgcatagctccaggcatg
ccccagactctgattaatctttttactccgcgcgcgcgaatcgtgccctgcattgatgag
cgctcgctggccttctgggcccttggctacggccaggccaccggggagcctgcggtggtg
atcacttcgtcgggcacggcggtggcgaatctgctgccggcggtggtggaggcatcgcac
agcggcgttcccttgctgttactcaccgccgaccggccgggggagctgcgcgacaccggc
gccaaccagaccatcgaccaggcacgcccttgccacccttgttgtgtgatgtgcgcgcag
gtgaagatttttggtgggtacacgaggtgggcggcggacgttccggcgccggatgcggcc
atgccggcgcgaatggcgctgacgacggtggacgctgcttacaggcacgccacaggagac
ggacccggccccgtgcacctgaacctgcaattccgagagccgctcgcgccctcacagacc
ccctggcccagctctgctctccaggcatgctcccctcttgctcaagggctggagaggtgg
gaagggtcagggcagcccttcacagcgccggtcgtcctggctggtgcccagagagggctg
ctggtggttgcccagatgggccaccctgaggactgccttgctgcactcaagatagcccgt
tccctgggctggccggtggttgcagacgtcctgtcgggtgcgcccgctgtttcttgcagc
ggcactgccctggatttcgctgggacttcttttgatagtcagcacaaagtactcatgctt
cttaagtgcacttccttagcctgtcgctgcgctgtaaatgcagggctgcgagtgggagcc
tcagggcgcagtgacgtggcattggtgcatcactttgaccacctgctcctggacaaggat
gccttatggcctgccctgcgcccagacgtggtgctgcagctgggcgggcggctggtgtcc
aagcgggctgcccagttcctggagtgggctgcccagccctgcttggaggagggcaggcct
gctgccaagtggatgtttgctgcggatgctgcccagcgccatgatgcctcgcacctgctg
tcccaccacatccagatgccccttcctgctctggccaccctggcttattggaaagctctc
ctgcaggtgcagagtgccgagaagggcactgacgtgacccttgatgacattcacgttgag
agtgctgtgggcggctgcatggatagaagtggtggttactcagagctggttcgcacactt
gacggctgtgctgctgcggagatcaatgccgcgctggaggagttgcagcctctcaccgag
ccgcatgtcgccagagagctttccaaagtcctgcccacagggacagggctgttcctgggc
aacagcatgcccatcagggacatggacatgtacgctgctcccagcgacaggcaggacaat
cccagccagcagggctcggtgacgagctcgggcatcggggcggcggtggcggcgaatcgc
ggcgcgagcggtatcgacggtgtcatgagcgcggcggccggctttgcgtacggcctcagc
cggggcgccaccctggtcgtgggggacatctccttcctgcacgatgtcaacggcctcaac
ctgctgcgcacaggggagatgcggccgccgctgacggtggtgctgatcaacaacgctggc
ggcggcatcttcagcttcctgccgattgccgaccagctgccgcccgacaccttctcccag
ctctgggcaacaccccagaacgtcgacctggccggcatgtgcagggcgcatggcatagcg
caccagagggtgactgagcgggtagacctgcgaaaggctttgcaagcagcctgggcgctc
aacaagcattctgtagtggaggtgattactaagcgtgacagcaacgttggccaccaccgc
tccatccaggagcgcgtcaggcagtccctgctgcgcgcgctgcgcaccgtcagcgccccg
gcaggtgcgctccacatgcctcttccaacacattcctgtgcatttggaattagtaagagt
aatttaataactcttgaacacttctatccaagcgggagcttgctggccaaggaactccgc
gttacagcggcgagctaccggcgttatggcctgccgctcctcaagccgctgacgacggat
tttgacaggaagctgcgcggaggcttcctgctccagatcagcgtggagtcagacaatggg
gttcacttcactggcattggggagattgcccccctacctggtgcggcctcctcttag
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