Coccomyxa subellipsoidea: COCSUDRAFT_11765 Help Entry COCSUDRAFT_11765  CDS       T02914                                  Name (RefSeq) DNA repair helicase   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism csl  Coccomyxa subellipsoidea Pathway csl03022   Basal transcription factors csl03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     COCSUDRAFT_11765   09124 Replication and repair    03420 Nucleotide excision repair     COCSUDRAFT_11765  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csl03021]     COCSUDRAFT_11765    03036 Chromosome and associated proteins [BR:csl03036]     COCSUDRAFT_11765    03400 DNA repair and recombination proteins [BR:csl03400]     COCSUDRAFT_11765 Enzymes [BR:csl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      COCSUDRAFT_11765 Transcription machinery [BR:csl03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      COCSUDRAFT_11765 Chromosome and associated proteins [BR:csl03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     COCSUDRAFT_11765 DNA repair and recombination proteins [BR:csl03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      COCSUDRAFT_11765 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 HBB Helicase_C_2 ResIII DEAD nSTAND3 AAA_11 Motif Other DBs NCBI-GeneID:  17044826 NCBI-ProteinID:  XP_005651360 JGI:  11765 UniProt:  I0Z847 LinkDB All DBs AA seq 771 aa AA seqDB search MRFVIEGLTVYFPYDYIYPEQFQYMLELKHALDAKGHCLLEMPTGTGKTITLLSLITSYQ LAHPEVGKLIYCTRTVPEMEKVLAELKELVHYRDRYFHEPGMEPPKILALGLSSRKNLCV HPRVSEEGSRESCDSQCRKLTASWVREAHVTNPDIETCTFYEGLEAAGAEGVMEPGVYTL QDMREYGRKKGWCPYFTARHMLAFANVMVYNYQYMLDPKASNAATLPPVSNMVSRELEKE CVVVFDEAHNIDNVCIEALSVTLRRQTLDSAMRNVGKLKAAVDKCKATDEQRLKAEYQRL IGGLQERGALPRGRPTPGGEDWLANPALPEDILREAVPGNIRRAEHFCAFLKRLVEHLKG RISVQAVEQESCTTFLATLQESMAVDGKTLRFCYDRLSSLLKTLEITDMDDFTPIHLVAD FATLVGTYAKGFAIIVEPYDDRLPSVPDPVIQLSCLDASLAVRPVFQKFQTVVITSGTLS PIDLYPRILNFNPVAIQSFAMTLTRDCMCPVVLTRGADQAAVSTAFDMREDENVIRNYGR MLVELAAAIPDGIVCFFVSYSYMDKIVSKWNDMGILQDLMAHKLVFIETVDVVETTLALD NFRRACDCGRGAVFLSVARGKVAEGIDFDRHYGRCVVMFGVPYQYTLSRILRARLEYLRE TFQIKESDYLSFDAVRQAAQCVGRVIRSKADYGLMVFADKRYQRADKRDKLPGWITTHLK DAHLNLSTDMLMHIAREFMRAMAQPYDGLAIGKSLLTEAQANAMSGTGASL NT seq 2316 nt NT seq  +upstreamnt  +downstreamnt atgcgcttcgtgattgagggactgactgtgtacttcccatatgattacatatatccagaa cagttccaatatatgctggagctgaaacatgcgttggatgcaaagggacattgcttgctg gagatgccaacaggcactgggaagaccattaccctgctgtccctcatcacatcttatcag ctggcgcacccagaggtgggcaagctcatatactgcacgcgaacagtgccagagatggag aaagtgctggccgagctgaaggagctggtacactaccgagataggtatttccatgaacct ggcatggagccgcctaaaattctggctctgggcctgagttcaaggaagaacctgtgtgtg cacccacgcgtctcagaggagggttctagggagagctgcgattcgcagtgcaggaagctg acagcctcctgggtgcgcgaggcgcatgtaaccaacccagacatcgagacctgcactttc tatgaaggtctggaggcagcaggcgccgagggtgtcatggagcctggcgtgtatactctg caggacatgcgagagtatgggcggaagaagggatggtgtccctacttcacagcgcggcac atgctagcctttgccaatgtcatggtctataattaccagtacatgcttgaccccaaggca agcaatgccgccaccctgccccctgtgtcaaacatggtgtcgcgggagcttgagaaggag tgtgtggtggtctttgatgaggctcacaacatagacaatgtctgcatagaggcgctgagt gtgacattaaggagacagacgctggacagtgcgatgaggaatgtggggaagctgaaggct gcggtggacaagtgcaaggccacagacgagcagcggctcaaagccgagtaccagcggctc attggaggcttgcaggagaggggagcgctgccccgggggaggcccacaccaggtggagag gactggctggccaacccagccctgccagaggacatcctgcgagaagctgtgccgggcaac atccggcgagcggagcacttctgcgcgttcctgaagcggctggtggagcacctgaagggc cgcatcagcgtgcaggctgtggagcaggagtcctgcaccaccttcctggccaccctccag gagtccatggccgtcgacggcaagacgctgcgcttctgctacgaccggctgtcatcgctg ctgaagacgctggagatcaccgacatggacgacttcacgcccatccaccttgtcgccgac ttcgccacccttgtggggacctacgccaaggggtttgccatcatcgtcgaaccctatgac gaccgcctgccctccgtccccgaccctgtcatccagctgagctgcctagacgcgagcctg gcagtgcggccggtgttccagaagtttcagacggtggtgatcactagcggcacgctgtcg cccatcgacctgtacccgcgcatcctcaacttcaaccccgtcgccatccagtccttcgcc atgaccctcaccagggattgcatgtgcccagtggtgctgacgcggggcgcggaccaggcg gctgtgagcaccgcgttcgacatgcgcgaggacgagaatgtgatccgtaactatgggcgc atgctggtggagctggcggctgccatcccggatggcatcgtgtgcttcttcgtgtcctac tcctacatggacaagatcgtgtccaagtggaacgacatgggcatcctgcaggacctgatg gcgcacaagctggtgttcatagagacggtggacgtggtagagacgacgctcgccctggac aacttccggcgcgcctgcgactgcggccgcggcgctgtgttcctctctgttgcgcgcggc aaggtggcggaggggatcgattttgaccggcactacgggcgctgcgtggtgatgtttggc gtgccctaccaatacaccctcagccgcatcctgagggcgaggctggagtatctgagggag accttccagataaaggagagcgattacctctcgttcgatgcagtgcggcaggctgcgcag tgcgtcggccgtgtcatccgctccaaagcagactatggcctgatggtgtttgcggacaag cggtaccagcgcgcggacaagcgggacaagttgccgggctggatcacgacgcacctgaag gacgcgcacctcaatttgtccacggacatgctcatgcacatcgcgcgcgagttcatgcgc gccatggcccagccctacgacggcctcgccatcggcaagtccctgctcaccgaggcccag gccaatgccatgagcggcaccggggcctccctctga

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