Coccomyxa subellipsoidea: COCSUDRAFT_12098
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Entry
COCSUDRAFT_12098 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_12098
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCSUDRAFT_12098
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
COCSUDRAFT_12098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Sec63
SNRNP200_wHTH
Helicase_C
ResIII
AAA_22
Cdd1
Semialdhyde_dhC_1
UvrD-helicase
HHH_5
TerS_N
Motif
Other DBs
NCBI-GeneID:
17044568
NCBI-ProteinID:
XP_005651102
JGI:
12098
UniProt:
I0Z7D9
LinkDB
All DBs
AA seq
745 aa
AA seq
DB search
RYFNAVQSEAFPVAFDTDVNMVIAAPTGSGKTVILELALLRLLSTCINDKGQFSYSRGSL
RAVYLAPSKALVQEKARAWQQSFGAHLNLAIVELTGDTDNVDFSTLSSADVICTTPEKLG
KLSHSITRRKVDQGGARFLGEVALLLIDEVHLLNENRGAVLEAGVVSRIKMISSLRAMSE
LPISGIRYIAISATIQNTGDVAEWLKVPPQGLLVFGEETRPVKLLTIVKGYAQGKTDFLF
EKQLNEYLRGIITEHSKGKPTLIFCSSRKGTEETAMHILAKSRNGLHGGYIHNDAQRGQL
HAAADRVIDKQLQQALRGGIGFHHGNLEPQDRATVENLFLHRAIMVLCTTSTLAQGVNLP
AHLVVLKGTRRWSREKGEVAGNKEYDRSTVLQMIGRAGRPQFDTEGVAVIMTQKEMVPQY
QNLLSGTEILESQLRDTFPEYLNAEIVLRNVTDVAGAVSWLKSTFLYVRAKRNPSSYGLP
QHAHSQEAFEKVMQEKFIFQFTRRLAMHGLVEAREAEDKGMSMSPLEPGTLMAQMYIRLP
TMVSLLEVPSHASMPTLISVLSHAEEFSGICLRRGEKKSLNSINKNEAAMRFFIPEASKP
SKPKERIKSAAEKIFVLVNEALTDHPTENLDYSMKQEIDQIVKVGARITACMAKLFRHKR
ALAATANACLLQKCLKQRMWDNSSQQCRQLPGIGKLLSERLVAAGLGKLRDLEAADPRLI
ENLTQRKYPFGAHNCLMLCCQNGTS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
aggtacttcaatgctgttcagtctgaggcttttcctgtggccttcgatacggatgtgaac
atggtgatagctgcgccaaccggttctggtaaaacagtgatactggagctggcccttctt
cgtctgctgtcgacatgcatcaatgataagggccagttcagctacagcagaggatcattg
agagcggtttacctcgctcctagcaaggccttggttcaggagaaagcaagggcatggcaa
cagagttttggagcacacctgaacctggccattgtcgaactgacaggagacacagacaat
gtggacttcagcaccctaagttctgccgacgtcatctgcaccacacctgaaaagcttggc
aagctctcacattcaatcacaaggcgcaaagttgaccagggaggcgctcgtttcttggga
gaggtggcactgctgctcatcgatgaggtgcacctcctcaatgagaatcgcggagctgta
ctggaggccggtgtagtcagccgaatcaagatgatcagcagtctccgcgccatgagtgag
ctgccaatctctggaattcgctacattgccatctctgcaacgatccagaacacaggtgat
gtggcagagtggctcaaggtaccacctcagggcttgctggtgtttggggaggagacgcgg
ccagtcaagcttcttaccattgtcaagggctatgcacaggggaaaactgacttcctcttt
gagaagcagctgaatgagtacctgagaggaatcatcaccgagcacagtaagggaaagcca
accctgatcttctgcagttcaaggaaggggaccgaagagacagcaatgcatattctggcc
aagtccagaaatgggctgcatggagggtacatccacaacgatgcccaaaggggccagctc
catgctgcagcagatcgggtaattgacaagcagctgcagcaggcattgcgcggagggatc
gggttccatcatgggaatcttgagccgcaagacagggccacagtcgaaaatctcttcctc
catcgagccatcatggtcctgtgcacaacatcaacattggcgcaaggggtgaacttgcct
gcgcacttggtggtgctcaagggcaccaggcgctggagcagagagaagggagaggttgct
ggcaacaaggagtacgatcgcagcactgtcctccagatgattggccgcgcaggccggcct
caatttgacaccgagggagtggctgtcattatgacacagaaggagatggtgccccagtac
cagaatttgctctctggcacggaaatcttggagtcacagctcagggacactttcccagag
tacctgaatgctgaaattgtcctcagaaacgtgacggacgttgcaggcgcagtcagctgg
ctgaagagcacctttctctacgtccgggctaaacggaatcccagctcttatggcttgcca
cagcatgcacactcccaagaggcatttgaaaaggtcatgcaagagaagttcatattccag
ttcaccaggaggctagccatgcatggactggtagaagctcgggaagctgaggacaaaggc
atgtcaatgagccctctcgagcctgggacgctcatggcacaaatgtacatcaggttgccg
actatggtcagtctgctggaggtcccgagccatgcatccatgccaacgctaatttctgtc
ttgagccacgccgaggagttctctgggatctgcctgcggagaggcgagaagaaatccctc
aacagcatcaacaagaacgaggctgccatgcgctttttcattccagaggcctccaagccc
tccaagccaaaagagcgcatcaaatcagctgcagagaagatcttcgtcctggtgaatgaa
gctctcactgaccaccccacagagaacttggattacagcatgaagcaggagattgaccag
atcgtcaaggttggggcgcgcatcaccgcatgcatggcaaagctcttccggcacaagagg
gctctggctgccacggcgaatgcatgcctgctgcagaagtgcctgaaacagaggatgtgg
gacaacagcagccagcagtgcaggcagctccctggaatcggcaaacttctgagcgagagg
ctagtggctgcaggcctcggaaaactgagggaccttgaggctgctgacccaaggctgatc
gaaaatctcactcagcgaaagtacccctttggtgcgcacaattgtttgatgttgtgttgc
cagaatggaacatcctga
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integrated database retrieval system
