Coccomyxa subellipsoidea: COCSUDRAFT_12490
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Entry
COCSUDRAFT_12490 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_EIPR1
PALB2_WD40
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
DUF7165
Beta-prop_IFT140_2nd
Beta-prop_WDR11_1st
AIDA
Motif
Other DBs
NCBI-GeneID:
17044701
NCBI-ProteinID:
XP_005651235
JGI:
12490
UniProt:
I0Z7S2
LinkDB
All DBs
AA seq
512 aa
AA seq
DB search
MEIGDCVLLLGGHMGPITNVAAAADGSLLITTSSDGSARVWELEKGECLAVLLGHTAAVN
AAAIDAEGRLAVTASADGTGRVWDLASGRCMHVLAGHERASAGVWAIALTPDARRAVTAG
EDFTARVWDTLTGRCLAVLQGHSGWVVDVAITADGAHAITASHDGTARVWDLARGTCERV
MAGHAGRLNAVKLGAGGTMALTVSDDYTARVWDLPSGRCVHVLKGHGGWLTDGAISLSGG
QAVTSSGDELAVVWDLHQGSCLNVLEGHSGEVRSVVLTRRGRFAVTGSADGTARVWDLHA
TAGHMQRAHNGRVTGLATHGSSAVSHGSDGAIVKFALQKRGERDASRVHSGGVNAALVTA
DGAMAVTLSKDCTARVWDLRSGSCMHVLVGHTDGLETASLSADGRTLLTAAYDRSARVWD
LRSGKCTAILAPGAQGHTDDITCVTFSPDSTLLATTSRDCSLRVWQVDSGSVDGLFMADT
GLTCCSFAGTPAPDTLVVGSESGVVHFLELPM
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggggactgcgtgctgcttctgggcggccacatgggccccatcaccaacgtg
gcggcggctgcagacggcagcctgcttatcaccacgtccagcgacggcagcgcccgagtg
tgggagctcgagaagggcgagtgcctcgccgtgcttctcggccacaccgctgcggtgaat
gcggcagcaatagatgcagagggccggctggcggtgacggcgagcgcggatggcacgggc
cgcgtgtgggatctggcaagcggccgctgcatgcacgtgctggcgggccacgagcgcgcc
agcgcaggcgtgtgggccatcgcgctgacgcccgacgcgcgccgcgccgtgacggccggc
gaggatttcaccgcccgcgtctgggacacgctcaccgggcgctgccttgccgtactgcag
ggtcactccggctgggttgtcgatgttgccatcactgcagacggcgcccacgccatcact
gcctcccatgacggcaccgcccgggtttgggacttggcgcgcggcacatgcgagcgggtg
atggcaggccacgcggggcggctgaacgcggtgaagctgggcgcggggggcaccatggcc
ctgactgtgtccgatgactacaccgcccgcgtctgggacctgccctctggccgctgcgtg
cacgtcctgaagggccacgggggctggttaacggacggagcgatctccttgagcggcggg
caggcagtgaccagctctggcgacgagcttgctgttgtctgggacctgcaccagggcagc
tgcctgaacgttctggaggggcactccggagaagtccgctctgttgtcctgactcgtcgc
ggcaggttcgcagtgaccgggtcagcggacggcacagcgcgcgtgtgggacttgcatgct
actgcaggccatatgcagcgcgcccacaatggccgcgtcaccggccttgcaactcacggc
tcctccgccgtctcacatggcagcgacggggccatagtgaaatttgcgctgcaaaagcgt
ggagagcgggacgcatcacgggtgcacagcggcggtgtcaatgcggccctggtgacagct
gacggcgctatggctgtgaccctgtccaaggactgcaccgcccgcgtgtgggacctgcgc
tcaggcagctgcatgcatgtgctcgtggggcacacggatggattagagactgcatctttg
agcgctgatgggcgcacactgctgacagccgcctatgacaggagcgcgcgagtgtgggac
ctgaggtctgggaagtgcacagccatacttgctccaggagcccaggggcacacggatgac
atcacgtgcgtcacattctccccggactccacactgctagccaccacctcgcgtgactgc
agcctcagagtctggcaagttgactcaggctctgtggacggccttttcatggcagacact
gggctcacctgctgcagctttgccggcacacctgcgcccgacactctggtggtgggcagc
gagagcggtgttgtgcatttcctggagctgcctatgtag
DBGET
integrated database retrieval system