KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_12490
Entry
COCSUDRAFT_12490  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
Organism
csl  Coccomyxa subellipsoidea
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_NWD2_C Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_DCAF12 Beta-prop_EIPR1 PALB2_WD40 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st DUF7165 Beta-prop_IFT140_2nd Beta-prop_WDR11_1st AIDA
Other DBs
NCBI-GeneID: 17044701
NCBI-ProteinID: XP_005651235
JGI: 12490
UniProt: I0Z7S2
LinkDB
AA seq 512 aa
MEIGDCVLLLGGHMGPITNVAAAADGSLLITTSSDGSARVWELEKGECLAVLLGHTAAVN
AAAIDAEGRLAVTASADGTGRVWDLASGRCMHVLAGHERASAGVWAIALTPDARRAVTAG
EDFTARVWDTLTGRCLAVLQGHSGWVVDVAITADGAHAITASHDGTARVWDLARGTCERV
MAGHAGRLNAVKLGAGGTMALTVSDDYTARVWDLPSGRCVHVLKGHGGWLTDGAISLSGG
QAVTSSGDELAVVWDLHQGSCLNVLEGHSGEVRSVVLTRRGRFAVTGSADGTARVWDLHA
TAGHMQRAHNGRVTGLATHGSSAVSHGSDGAIVKFALQKRGERDASRVHSGGVNAALVTA
DGAMAVTLSKDCTARVWDLRSGSCMHVLVGHTDGLETASLSADGRTLLTAAYDRSARVWD
LRSGKCTAILAPGAQGHTDDITCVTFSPDSTLLATTSRDCSLRVWQVDSGSVDGLFMADT
GLTCCSFAGTPAPDTLVVGSESGVVHFLELPM
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggaaattggggactgcgtgctgcttctgggcggccacatgggccccatcaccaacgtg
gcggcggctgcagacggcagcctgcttatcaccacgtccagcgacggcagcgcccgagtg
tgggagctcgagaagggcgagtgcctcgccgtgcttctcggccacaccgctgcggtgaat
gcggcagcaatagatgcagagggccggctggcggtgacggcgagcgcggatggcacgggc
cgcgtgtgggatctggcaagcggccgctgcatgcacgtgctggcgggccacgagcgcgcc
agcgcaggcgtgtgggccatcgcgctgacgcccgacgcgcgccgcgccgtgacggccggc
gaggatttcaccgcccgcgtctgggacacgctcaccgggcgctgccttgccgtactgcag
ggtcactccggctgggttgtcgatgttgccatcactgcagacggcgcccacgccatcact
gcctcccatgacggcaccgcccgggtttgggacttggcgcgcggcacatgcgagcgggtg
atggcaggccacgcggggcggctgaacgcggtgaagctgggcgcggggggcaccatggcc
ctgactgtgtccgatgactacaccgcccgcgtctgggacctgccctctggccgctgcgtg
cacgtcctgaagggccacgggggctggttaacggacggagcgatctccttgagcggcggg
caggcagtgaccagctctggcgacgagcttgctgttgtctgggacctgcaccagggcagc
tgcctgaacgttctggaggggcactccggagaagtccgctctgttgtcctgactcgtcgc
ggcaggttcgcagtgaccgggtcagcggacggcacagcgcgcgtgtgggacttgcatgct
actgcaggccatatgcagcgcgcccacaatggccgcgtcaccggccttgcaactcacggc
tcctccgccgtctcacatggcagcgacggggccatagtgaaatttgcgctgcaaaagcgt
ggagagcgggacgcatcacgggtgcacagcggcggtgtcaatgcggccctggtgacagct
gacggcgctatggctgtgaccctgtccaaggactgcaccgcccgcgtgtgggacctgcgc
tcaggcagctgcatgcatgtgctcgtggggcacacggatggattagagactgcatctttg
agcgctgatgggcgcacactgctgacagccgcctatgacaggagcgcgcgagtgtgggac
ctgaggtctgggaagtgcacagccatacttgctccaggagcccaggggcacacggatgac
atcacgtgcgtcacattctccccggactccacactgctagccaccacctcgcgtgactgc
agcctcagagtctggcaagttgactcaggctctgtggacggccttttcatggcagacact
gggctcacctgctgcagctttgccggcacacctgcgcccgacactctggtggtgggcagc
gagagcggtgttgtgcatttcctggagctgcctatgtag

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