Coccomyxa subellipsoidea: COCSUDRAFT_12711
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Entry
COCSUDRAFT_12711 CDS
T02914
Name
(RefSeq) ATP-dependent DNA helicase
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_12711
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCSUDRAFT_12711
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
COCSUDRAFT_12711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
Motif
Other DBs
NCBI-GeneID:
17044131
NCBI-ProteinID:
XP_005650671
JGI:
12711
UniProt:
I0Z658
LinkDB
All DBs
AA seq
517 aa
AA seq
DB search
MTFGISVLTCLACRPHQHEIINATLQGRDVLCLMPTGGGKSLCYQLPALISGGLTLVVSP
LLSLIHDQVLGLRSLGIPVISLSSLTPKEEITAAYKQMDSDTDIRFVYVTPERVVSAKRF
MSKLEKLYKAGRLTRIAIDEAHCCSQWGNDFRPDYKKLGVLKQQFPEVPILALTATATDL
VCQSIKDILRISACEFFRSSVDRPNLYWTVRQKPAKAEDVTADMIAWIRGNYRLTDCGIV
YCQTRKESESLAAELRQQGMRAACYHADMAAGVREAVHSQWSAGEVQICVATVAFGMGIN
KPDVRFVIHHSLSKSVENYYQEAGRAGRDGERAVCMLYYRFADALKQAAMVSFEPGWEQR
LGAIMRYAAASSTCRRSLISRHFGEAPAKCHAMCDCCAQAGSGAVAERRGVTDAAAAVAR
TLADWPAAEKRATLLQLIDRWRASKARYAKIGKGMSRDDNERVIAQMVYDGYIQFDFGYT
AYATNSYLKATQQSSQLLQGVMLCPILYYLLPSRREK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgggatctcggtgctaacatgcctggcctgcaggccacatcagcatgagatc
atcaatgcaacgctgcagggcagggatgttctctgcttgatgcccacaggtggtggcaaa
agcctgtgttaccagctgcctgcgcttatcagtggaggcctgactctcgttgtcagcccc
ctgctgtctctcatccatgaccaggtactgggtcttcgcagtcttggcatcccagtaatt
tctctcagcagcctcactcccaaagaggagatcactgcagcatataagcagatggactca
gataccgacatccgctttgtgtatgtgacccctgagcgagtggtcagtgccaagcgcttc
atgtcaaaactggagaagctttacaaggcaggaagattgacacgcattgccatagacgaa
gcacactgctgctcacagtggggcaatgacttcaggcctgattacaagaagctgggagtg
ctgaagcagcagttccctgaggtgccaatcctggcgctgacagccaccgcaacagacctg
gtgtgccagagcataaaggacattctgcgcatcagcgcctgtgaattttttcgctcctct
gtggaccgaccgaacctctactggacggtgaggcagaagccagcgaaagcagaggatgta
acggccgacatgatcgcctggatcagaggcaactaccgtctgacagactgcggaatcgtg
tactgccagactcgcaaggagagcgagagcctggctgctgagctgcggcagcagggcatg
cgcgcagcctgctaccatgctgacatggccgctggtgtcagggaggctgtgcacagccag
tggagcgcaggtgaggtgcagatctgcgtggccacggtggcgtttggcatgggcatcaac
aagccagacgtgcgctttgtcatccaccacagcctctccaagagcgtcgagaactactac
caggaagcagggagggccgggagggacggcgagcgcgcggtgtgcatgctgtactaccga
tttgcggacgcgctgaagcaggcggccatggtcagcttcgagcccggctgggagcagcgc
ctgggcgccatcatgcgctacgctgccgcctcctccacctgccgaaggagcctcatctcc
cggcattttggcgaggcgcccgcaaagtgccacgcgatgtgcgattgctgcgcccaggcg
ggcagtggcgcggtggccgagcggcggggcgtgacggatgcggccgcggccgtcgcgcgc
acgctggccgactggccggcagccgagaaacgcgccaccctcctgcagctcatcgaccgc
tggcgcgccagcaaggcacgttatgccaagattggcaaggggatgtccagggacgacaac
gagcgcgtcatcgcgcagatggtctacgatgggtacatccagtttgactttgggtacact
gcctacgcaacgaattcctacctcaaggcgacacagcagagctcccagcttctccaaggt
gtgatgctctgtcccattttatattacctgctcccttcaagaagggaaaagtga
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