Coccomyxa subellipsoidea: COCSUDRAFT_12949
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Entry
COCSUDRAFT_12949 CDS
T02914
Name
(RefSeq) long-chain-fatty-acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00061
Fatty acid biosynthesis
csl00071
Fatty acid degradation
csl01100
Metabolic pathways
csl01212
Fatty acid metabolism
csl04146
Peroxisome
Module
csl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
COCSUDRAFT_12949
00071 Fatty acid degradation
COCSUDRAFT_12949
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
COCSUDRAFT_12949
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csl01004
]
COCSUDRAFT_12949
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_12949
Enzymes [BR:
csl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
COCSUDRAFT_12949
Lipid biosynthesis proteins [BR:
csl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
COCSUDRAFT_12949
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of breast milk
COCSUDRAFT_12949
Exosomal proteins of breast cancer cells
COCSUDRAFT_12949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
17043933
NCBI-ProteinID:
XP_005650473
JGI:
12949
UniProt:
I0Z5L0
LinkDB
All DBs
AA seq
476 aa
AA seq
DB search
MCRWASLADAHGDKLAAIDPHQSPATKLTFLELESQIIQFAAGLRALSLKPGDKVALFSE
NSSRWLVADQAVMTLGAADAVRGASSPAEEMAYIGVMLTHGNLKYQMDNLSFFLKPKPGE
RSLSLLPPWHIYERSCGYYLFSRACTQVYTNIRKFREDLSAYPPHHFVCVPMVLDTLYGR
VQQQIKKSSLVKRTIARLFFAIGAAYIRARRILDGVLVFGKIRAALGIMSTVISGGGSLA
RHLDDFYETLALPVLNGWGLTETSPVLSCRRDATRENVRGSVGLPIPGTVVRVVDPETLR
PVPEGQQGLLLAKGPGVMKGYFNDEAATAKAFVAGDGWFDTGDLGWRAPTGVAGSNMAGH
IVLTGRAKDTIVLSSGENVEPAPIEDACAVSPFIQHLVLVGQDHRMLGALVRAVIRAEIN
KACASRPHFERVAAFTVLQEPLSVEGGTLTRTFKPRRPAIHAKYAREVADVLSKLR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggtgggcgtctcttgctgacgcacatggtgacaagctggctgccattgacccc
caccagagcccagcaacaaagctgacgttcctggagttggaatctcagatcattcagttt
gcagcgggtctgcgagctctcagcctgaagcctggagacaaggtggcgctgttcagcgag
aattcgtctcggtggctggtggcggatcaggcagtgatgacgctgggcgctgcagatgcg
gtgcgcggggccagcagcccggcggaggagatggcctatattggtgtcatgctgacgcat
ggcaacttgaagtatcagatggacaacttaagcttttttctgaagcccaagcccggggag
cgctcgctcagcctgctgcctccctggcacatctacgagcgctcctgcggctactacctc
ttctctcgtgcctgcacccaggtatacaccaacattcgcaagttcagggaggacttgtcc
gcctatccgccccaccactttgtctgcgtccctatggtcctcgacacactgtacggcagg
gtgcagcagcagatcaagaagagctcgctggtgaagcgcaccatagcgcggctgttcttc
gccatcggcgcggcctacatccgggccaggcgcattctggacggcgtgctggtgtttggc
aagattcgggcggcgctggggatcatgagcacggtgatcagcggcggcggctccctggcg
cgccacctggacgacttctacgagacgctcgcgctacccgtgctcaatggctggggcctc
accgagacctcccccgtgctgtcctgccgccgggacgccacgcgcgaaaacgtgcgcggc
agtgtcggcctgcccatccccggcaccgtcgtccgcgtcgttgatcccgagaccctgcgc
cccgtgcccgagggccagcaggggctgctcctggcaaagggtccgggggtgatgaagggt
tacttcaatgatgaagcggccaccgccaaggcatttgtggctggcgacggctggtttgac
accggtgatctcggctggcgcgcaccaacgggcgttgctggcagcaacatggcggggcac
atcgtgctcaccggccgtgcaaaggacacgattgtgctgagcagcggcgagaacgtggag
ccggcgccgatagaggacgcatgcgcggtgtcgccattcatccagcacctggttctggtg
gggcaggaccaccgcatgctgggcgccctcgtgcgggcggtgatccgcgcggagattaac
aaggcgtgcgcatcgcggccgcactttgagcgcgtggccgccttcacggtactgcaggag
ccgctgtctgtggagggtggcaccctcacgcgcacattcaagccgcgccggccggccatc
cacgccaagtatgcgcgcgaggtcgccgacgtcctctccaagctgcgctga
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