Coccomyxa subellipsoidea: COCSUDRAFT_13771
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Entry
COCSUDRAFT_13771 CDS
T02914
Name
(RefSeq) ARM repeat-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_13771
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_13771
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
COCSUDRAFT_13771
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCSUDRAFT_13771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUF_NOP9
PUF
CPL
Motif
Other DBs
NCBI-GeneID:
17043303
NCBI-ProteinID:
XP_005649845
JGI:
13771
UniProt:
I0Z3T2
LinkDB
All DBs
AA seq
446 aa
AA seq
DB search
MFLKYAVRRQCDQHLHIFKTRWHSQDAIMKWETLRRHDTESKQREELISTLLKELKGDLT
RMAASKTGSRVLQACVKHGNPNQRAQILEELQPSFLELSKSPYAHHLVCKLIDTAPKSAT
EGFLKAFKGQVVKLLRHPCGSRVINELYLRASGKQRTVLAAEFYGREMILFSQDAAPKNL
AETLSSMDDTAKYKVMQQMSINLIPIMEKGLLDPVIVHGLVAEYMEAAPASAVADAVEML
AGPNLLHMVHSHHGATAACQVLAMATAKQRKKVVKAMKGRHVKVMACDEWAHIVVMAALE
HTDDTALLRKTLVPELLGDLEELCQHKVACQIFLHLLAPSSRAYVPPHVSALLAPHHAAV
TASKPASEATAATTDEPSEESPSGVPGFSKKDAGLRRQELLGSGKGSLATELTTVCAANA
TKLLLNPKGSDLLVEAACGAEGGLQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaagtatgctgtgaggcgtcagtgtgaccaacacttgcacatatttaaaacg
aggtggcattcacaggatgcgatcatgaagtgggaaactttgcggcggcatgacacggaa
tcaaagcagcgagaggaattgatcagcactctcctcaaggagctcaagggagatctcacg
cgcatggcggcctccaagactggttcgcgcgtcctgcaagcttgtgtgaagcatggcaac
cctaaccagagagcccagatcctggaagagctccagccctcttttctagagctgtcaaag
agcccctatgcccatcacttggtgtgtaagctgattgacacagcgccaaaatcagcaacc
gaaggctttctcaaggccttcaagggccaggtggtcaaactgttgcgccacccatgcggc
tcgagggtcatcaacgagctgtacctacgcgcttcaggcaagcagcgcacagtcctggca
gctgagttctatggcagggagatgatccttttcagccaggatgctgctcccaaaaatctt
gcggagaccctgagcagcatggatgacacggccaagtacaaagtgatgcagcagatgagc
atcaaccttattccaatcatggagaaggggctgcttgaccccgtcatagtgcacgggctt
gtggcagagtacatggaagcggccccagccagtgctgtggcagatgctgtggagatgctg
gctgggcccaatctgctgcacatggtgcactcgcaccacggcgccactgctgcatgccaa
gtgctagccatggccaccgccaagcagcgcaaaaaggtcgtcaaggccatgaaaggtagg
catgtgaaggtcatggcatgtgatgaatgggcgcacattgttgtcatggctgcgctggag
cacacggatgacacagccctcctccgcaagactttggtccctgaattgctgggggatttg
gaagagctttgccagcacaaggttgcgtgccagatatttctgcacctccttgcccccagc
agtcgtgcatatgtgccaccacatgtttctgccctcctcgctcctcaccacgctgccgtg
accgccagcaagcctgcttcggaagccacagcagcgactaccgatgaacccagcgaggaa
agcccatcaggggtgcctgggttcagcaagaaggatgcagggttgaggcggcaggagctt
cttggcagcggcaagggatccctggccacagagttgacgacagtatgcgcagccaatgcg
acaaagctgctgctcaatccgaaaggatctgacttgctggtggaggccgcatgtggggcc
gaaggaggtttacagtcatag
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