Coccomyxa subellipsoidea: COCSUDRAFT_1385
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Entry
COCSUDRAFT_1385 CDS
T02914
Name
(RefSeq) Poly(A) polymerase
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_1385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_1385
Enzymes [BR:
csl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
COCSUDRAFT_1385
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
COCSUDRAFT_1385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
PAP_RNA-bind
MTPAP-like_central
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
17038835
NCBI-ProteinID:
XP_005645400
JGI:
1385
UniProt:
I0YR37
LinkDB
All DBs
AA seq
504 aa
AA seq
DB search
EPFSRAPPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWL
GLGEFGEVETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLS
DLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSV
RSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCK
LYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITP
AYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEP
VPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVEPFVTV
RPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQVMGY
LSWKEGMHVLITHQMQKALPSFVL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gagcctttctctcgcgcacctcccaccaccaaagactttcagcagaccgctgaccttgaa
ctgtgtcttcgagaacagggcctttacgagagcaatgaggaggcagtgctgcgagaggaa
gtgctggggcgcttggacaggcttgtgaaggagtgggtgcagagggtgtgcgcctggctg
ggcttgggagagtttggggaagttgaaacaaatgcgaaaatcttcaccttcggctcttac
cgcctgggtgtgcatggacctggggccgatattgacaccttgtgtgtcggtccgcggcat
gtgtcaagggaccttcactttttcgggactgaagagcactgcctgcagaaaatgctctcc
gaccttccagaggtgacagagctgcagcccgtggtggactcgtttgtgcctgtcatcaag
atgaagttctccggtgtcagcatcgatctcctgtacgcccagctggccactgcggtggtg
ccagagaacctggatgtgggcgccatctccactctccgcaacgcagacgacaagagcgtc
cgatccctcaatggctgccgcgtcacagacaccctcctgaaccaggtggagtcgatcgag
accttccgcacggcgctgcgggtgatcaagctgtgggctgagcggcggggcatctactcc
aatgtggtcggctatctgggcggcgtcaattgggccatcctggtggcctacacctgcaag
ctctacccctgcggcatcgcctctgtcatcgtggaccgcttcttcaaggtgtttgcgagg
tggccgtggccgacgccgatcatgctgcgggagatagagcacgatgcgatggggctgcag
gtgtgggacccgcgcatcaacccccgcgactccatgcacctcatgcccatcatcaccccc
gcctaccccgccgccaactcgtcctacaacgtgtccgagagcacgctcgccgcaatgaag
gcgcgcacacaactccatcaaacctgtctgctgcaggaggaatttgagcatggcgagaag
gtgtgcacgaggatcttggccgagggaggcctcaccaagtggcacaagctgctggagccc
gtccccttcttcaggaactaccggaactacctgcaggcgcgcctcttcctcaccccttcc
caattcatcccatttgcaacctgctgctttatgcactgtattctccaggaggcgtgggac
ggctgggtgcactcgcggctgcgccagctggtcatgcgggtggagccctttgtgacggtg
cggccgtggcccaaggccatcttcccgccgcgtggccccgaggcggccggccagccgcgc
cgctgcttctacttcatgggcctcaaaaagaagccgctcccctcgcagcccggcggccgc
gcctccagcgtcaatctcaacaatcccgtgcaggagttcaagaaccaggtgatggggtat
ctgtcgtggaaggagggcatgcacgtgctcatcacgcaccagatgcagaaggcgctgcca
tccttcgtcctg
DBGET
integrated database retrieval system