Coccomyxa subellipsoidea: COCSUDRAFT_14238 Help Entry COCSUDRAFT_14238  CDS       T02914                                  Name (RefSeq) ARM repeat-containing protein   KO K20184   vacuolar protein sorting-associated protein 41 Organism csl  Coccomyxa subellipsoidea Pathway csl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:csl00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     COCSUDRAFT_14238  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csl04131]     COCSUDRAFT_14238 Membrane trafficking [BR:csl04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     COCSUDRAFT_14238 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_Vps41 Beta-prop_Vps41 WD40_WDHD1_1st Beta-prop_HPS5 WD40_CDC20-Fz Clathrin WD40 WD40_Prp19 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Death_EDAR PEP5_VPS11_N TPR_GEMI5 ANAPC4_WD40 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Motif Other DBs NCBI-GeneID:  17042598 NCBI-ProteinID:  XP_005649140 JGI:  14238 UniProt:  I0Z1S7 LinkDB All DBs AA seq 875 aa AA seqDB search MAEEPVLAKRRGSRSVEIPHSDDSQPPNLGDTEEEPRLKYQRLGCDVAELLGSNAATCLC VSDKILALGTHNGTVHVLDYIGNEVKRIEAHKGPVNEICFDEAVEYIASCSDDGSVVIQG FYTEEITTVKYKRPIKSVALDPRYGSRKTREFVTGGLAGQLLLGWLGNKDTILHSGEGPI QEIKWSGTLISWANDLGVKVYDTTIHQRIAYIERPRSSLKHEKLQCHMFWEGESLLHIGW ADCVKVARVRPATAVSGAQTDSKRSLQIVASFQMDYLIAGIAPFGEDICLLACALAKQGD GAEQVEAGTTGDMTAVVPAEAPRPELKIVTWQNEEVASDALSVHGYEHYEATDYALAAWY PRRPRAHGAPEDAAGTSGRSTDFTKWWADGDEPLYYIISSKDVVVGRPRDGDDRVAWLLD HKHFDKALAVLETDRGLKASTHEQVTQRYLEYLVSQRRFDEAAQVCARLLKDNAAGWERW VYVFAQLRQLPALAPYIPTKEPRLRQTAYEMVLHSFLLAPADHPRLLDALLKWPPDLYSI PSLTQSVINRARGPGGDSKALLQSAAHLYQLQGRFDLALAILLRLQQPDVFSFVTDHSLL PLLKPSHVAALVRIDEVRAIRLLVDHHEEVTAATIVPALQEAELWRKRIYYYLDWLFQKD SNAGADFAGLQVELYADYDAGRLMAFLVSSQAYALEAAAELCEARGLVREQVFVLGRMGN SRQALHLIIRRLADIPQAKHPFVQMQRDDELWELLISLAIGSADLTGALLDHIGGYVDPL RLVQKIPAGLEIPRLRDRLVHIIADFRTQTSLREGCNAILHHDCLHLAQVLLLPFFPSSL LQRGAAKGSICCCICRWYVANSCRRSSCSSGLPCM NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atggcggaggagcctgttcttgcaaaacgaagaggcagtagaagcgtggagattcctcac agcgacgacagtcagcctcctaatttaggtgatactgaagaagagccaaggcttaaatac cagagactagggtgtgacgtagctgagttgctaggcagtaatgcagcaacatgtctgtgt gtctcggacaagatcctggcgttgggcactcacaatggcacagtgcacgtactggactac atcggcaacgaggtgaagcgcatcgaggcgcacaaggggcctgtcaacgagatatgcttt gatgaggcggtggaatacattgccagctgctctgatgatggctctgttgtgatccaaggc ttttacacagaggagatcacaacggtcaagtataaacggcccatcaagagcgtggcgttg gatccgcggtatggctcaaggaagacccgggagtttgtcacaggcggactagcagggcag ctcttactgggctggctgggcaacaaagacaccatcctgcactccggcgagggcccgatc caagaaatcaagtggagcggcactttgatctcgtgggctaacgacctgggcgtgaaagtg tatgacaccacaatccatcagcgcattgcttacatcgagcgtcctcgctcgagcttgaag catgaaaagctgcagtgccacatgttctgggagggagagtccctgctgcacattgggtgg gccgactgcgtcaaggtggcacgcgtccgcccagccactgcagtctccggcgcacagaca gactcgaagcgctccctccagattgtcgcttcattccagatggactacctcattgcaggg attgcgccgtttggagaggacatctgcttgctagcctgcgcattggccaagcaaggcgac ggcgcagagcaagtggaggcaggcacaacaggggacatgactgcagtagtcccagcagag gctcccagaccagagctaaagatagtgacgtggcagaacgaggaggtggcatcggacgcg ctgtccgtccacggctatgagcactatgaggcgaccgactacgcgctggctgcctggtac ccgaggcggccgcgcgcgcacggcgcccccgaggacgcagccggcaccagcgggcgatcc acggacttcaccaagtggtgggccgacggggacgagcccctctactacatcatctcctcc aaggatgtggtggtggggcggccgagggatggggacgacagggtggcctggctgctagac cacaagcactttgacaaggcgctcgctgtgcttgagacggaccgagggctcaaggcatcc acccatgagcaggtgacgcagcgttatctggagtatctggtctcgcagcggcgctttgac gaggccgcccaagtctgtgccaggcttctcaaggacaatgcagcggggtgggagcggtgg gtgtacgtttttgcgcagctacggcagctgccggcgctggcgccgtacatccccacaaag gagccgcggctgcggcagacggcgtacgagatggtgctgcactccttcctgctggcccct gcggaccacccgcggcttctggatgctctgctcaagtggccccccgacctctactccatc ccctccctcacccagtccgtcatcaacagggcacggggcccaggcggcgacagcaaggcg ctgctgcagtcggcggcgcacctgtaccagctgcagggccgctttgacctggcgctcgcc atcctgctgcgcctgcaacagccggacgtcttctcctttgtcaccgaccacagcctgctc ccccttctcaagccctcccacgtggctgccctcgtgcgcatcgatgaggtgcgcgcgata cggctgctggtggatcaccacgaggaagtcacggccgctaccatagtcccagccctgcag gaggcggagctgtggcgcaagcgcatttattactacctcgactggctcttccagaaggac tccaacgccggcgcagactttgcaggcctgcaggtggagctgtacgctgactacgatgcc gggcggctgatggcattcctggtgagcagccaggcgtacgcgctggaggcggccgcggag ctgtgcgaggcacgcggactggtgcgcgagcaggtctttgtgcttggccgcatgggcaac tcgcgccaggccctccacctcatcatccgccgcctcgccgacataccccaggcaaaacac ccatttgtgcagatgcagcgcgacgacgagctgtgggagctgctcatcagcctcgccatc ggcagcgccgacctgacaggtgctctgctggaccacataggcggctacgtggatccgctg cggctggtgcagaagattccggcggggctggagattccgcggctgcgcgaccgcctggtg cacatcatcgccgacttccgcacgcagacgtccctgcgtgagggctgcaacgccatcctc caccacgactgcctccacctcgcccaggtgctccttcttcccttttttccgtcctccctt ttgcagcgtggtgctgcaaaagggtcaatctgctgctgcatttgtcgctggtatgtggca aacagttgcaggcgcagctcgtgcagtagtggactgccttgcatgtga

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