Coccomyxa subellipsoidea: COCSUDRAFT_14592
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Entry
COCSUDRAFT_14592 CDS
T02914
Name
(RefSeq) shikimate 5-dehydrogenase
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
csl00999
Biosynthesis of various plant secondary metabolites
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
csl01230
Biosynthesis of amino acids
Module
csl_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
COCSUDRAFT_14592
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
COCSUDRAFT_14592
Enzymes [BR:
csl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
COCSUDRAFT_14592
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
COCSUDRAFT_14592
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Ortholog
Paralog
GFIT
Motif
Pfam:
DHquinase_I
Shikimate_dh_N
SDH_C
Pyr_redox_2
FAD_binding_2
Shikimate_DH
DAO
F420_oxidored
HI0933_like
2-Hacid_dh_C
DUF3141
adh_short
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
17041901
NCBI-ProteinID:
XP_005648447
JGI:
14592
UniProt:
I0YZT4
LinkDB
All DBs
AA seq
514 aa
AA seq
DB search
SVTADTVNGAIAEIREVADFGADVVELRMDFLKDIDLFNPAAFLNPLLDACNAVRLPAIV
TFRPNWEGGQYDGPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPL
TTKVILSHHDYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGE
RPVIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSAT
KVFGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAYPSFSGISITIPHK
LAALECADDADPVAARIGAANTLVRQPGGGLKAYNTDWSAAISAVEAALGGSKAGGESAL
KGLRVVVVGAGGAGKALAFGAIERGAEVLVCNRQGHPCTFLIIQWTDMAVEYADVAAGKV
AGDVLMNSTSIGMHPKENETPVSAGALGGYKVVFDAVYTPLETLLLKDAKDQGCITVSGL
EMFVGQAAEQFELFTGKPAPLDLMRQATLDSIKS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
agtgtcactgcagacacagtgaatggagctatagcagaaattagggaggttgcagacttt
ggtgcagacgtggtggagctgcgaatggacttcttgaaggatatagatctcttcaatcca
gcagccttcctcaatccacttctggatgcatgcaatgcagtcaggctgccagccatcgtc
acattcagacccaactgggaagggggacagtacgatggtcctgagccgctaaggctggca
gtcctgaagtacgcagcagtccttggggctccctatgtggacgttgaatacctggctgca
aatttcttcttcgcgagtgaatgcatgcatgctggcacaggtgagggggaggtaccgttg
accacaaaggtaatcctgtcccaccacgactacgatgagacacccagcgacgagatcctg
gaagccctggtgaaggagatgttcaagggtggggctgacatcgccaagatcgccaccact
gcacagaggatcgaagactctgcgcgcatgctggccttgcccggcaagtcctcgggtgag
cgtccggtgattgcgctcgccatgggcgagaaggggctgacgtcgcgagtgctggcgccc
aaattcggcggctacctgacatttggggctttgtctcccgcgaaggccagcgcgcctggg
cagccaactgtgactgagctgcggcagctgtaccggctgcaaaaccaaagcagcgccacc
aaggtttttggcattgtgggcaacccggtctcccacagccgcagtccagcgctgcacaac
gcagcgctggcggcggccggccttgacgcggtgtatgtacctctgctggtggacgagctg
cgccccttcctggatgcctaccccagcttcagcggaatcagcatcaccatcccacacaag
ctggcggcgttggagtgcgctgacgacgcagaccctgtggcggctcgcatcggggcggcc
aacactctcgtgcgccagcctggcggcggcctcaaggcctacaacaccgactggtctgca
gccatatctgccgtcgaggctgcactgggaggcagcaaggctggaggggagtctgcactg
aaggggctacgcgtggttgtagtgggggctgggggcgcagggaaggccctggcttttgga
gccattgaaaggggtgctgaagtgcttgtatgcaacaggcaaggccatccctgcaccttc
ttgatcatacaatggacagacatggcagtggagtacgctgacgtggcggctggcaaggtg
gcaggggatgtgctcatgaacagcacatccatcggcatgcaccccaaggaaaacgagacc
cccgtcagtgcaggggctctcggcggctacaaggtggtctttgatgcagtctacacccca
ctggaaacactgctgctcaaggatgcaaaggatcagggttgcatcactgtgagcgggctg
gagatgtttgtgggccaggcagcggagcagtttgagctcttcactggcaagcctgcgccg
ttggacttgatgcggcaggctacactggacagcataaagagttga
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