KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_14939
Entry
COCSUDRAFT_14939  CDS       T02914                                 
Name
(RefSeq) AAA-domain-containing protein
  KO
K22766  fidgetin-like protein 1 [EC:5.6.2.-]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_14939
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_14939
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    COCSUDRAFT_14939
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     COCSUDRAFT_14939
SSDB
Motif
Pfam: AAA AAA_5 RuvB_N TIP49 AAA_lid_3 AAA_22 AAA_16 RNA_helicase Mg_chelatase AAA_14 DUF5906 bpMoxR AAA_19 AAA_2 nSTAND3 AAA_7 IstB_IS21 AAA_30 Torsin Parvo_NS1
Other DBs
NCBI-GeneID: 17041905
NCBI-ProteinID: XP_005648451
JGI: 14939
UniProt: I0YZT8
LinkDB
AA seq 356 aa
MSRQTVVATLQGLDGELPEALQKLDPRIVEMVCSEILDGKSSVQWDDIAGQDQAKRLVQE
LVVWPMLNPHLFKGARAPPKGLLLFGPPGTGKTLIGKAIAANISATFFSISASSLTSKWI
GEGEKMVRALFAVAGCLQPSVIFIDEIDSVLSARKSEGEHEASRRLKTEMLIQMDGCDPS
AADRRVLLVGATNRPEELDEAARRRMPKQLYIPLPCAAARSAMIERQLGPASGVSTTLSV
SDIAKIVEKTAGYSGKHTAGSDMRALVQEACQGPVRDAVALHAHKLADLSEADLRPLILR
DFQARIPMLQNYLPSLLFTFDVEDRPHRARVSALKLGHNESRMTWSYLLSMTLCSC
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtccagacaaacggttgtggcaacattgcaaggtctggatggggagctgccggaagct
ctgcagaagctggacccgcgcatagtggaaatggtgtgctcggagatcctggatggcaag
agcagcgtgcagtgggatgacattgctggccaggaccaggccaaacgcctggtgcaggaa
ctcgtcgtgtggcccatgctcaacccccacctcttcaagggggcacgcgcgccgcccaag
ggcctgctcctgtttgggccgccgggcaccggcaagacgctcatcggcaaggccattgcc
gcaaacatcagtgcgacattcttctccatttcggcctcctccttgacctcgaagtggatt
ggcgagggtgagaagatggtgcgcgctctgtttgccgtggccggctgcttgcagcccagc
gtcatattcatcgacgagatcgactccgtgctgtccgcgcgcaaatcagaaggggagcat
gaggcgagccggcggctgaagacggagatgctgatccagatggacggctgcgacccgtcc
gcagccgaccgccgagtcctgcttgtgggtgccaccaaccgacccgaggagctggatgaa
gctgcgcggcggcgcatgccgaagcagctgtacataccgctgccgtgcgcggccgcgcgc
tctgccatgatcgagcgccagctggggcccgcctcgggcgtcagcactacgctgtcagtg
tccgatatcgccaagatcgtcgagaagactgccggctactcaggcaagcacactgcaggg
tcggacatgcgtgcgctggtgcaggaggcgtgccagggcccggtgcgcgatgcggtggcg
ctgcatgcccacaagctggccgacctgtccgaggccgacctgcgcccactcattctgcgc
gacttccaggcgcgcattcccatgctgcaaaattatctgccctcactattgttcacgttt
gatgtcgaggaccgtccccatcgtgcaagagtatctgctctcaaattgggtcataatgaa
tcccgaatgacttggtcatatctgctgtcgatgacactttgtagctgttga

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