Coccomyxa subellipsoidea: COCSUDRAFT_15325
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Entry
COCSUDRAFT_15325 CDS
T02914
Name
(RefSeq) DNA topoisomerase I
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csl03032
]
COCSUDRAFT_15325
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COCSUDRAFT_15325
DNA replication proteins [BR:
csl03032
]
Eukaryotic type
DNA Topoisomerases
COCSUDRAFT_15325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
CCDC93_CC
DUF4407
Motif
Other DBs
NCBI-GeneID:
17041759
NCBI-ProteinID:
XP_005648311
JGI:
15325
UniProt:
I0YZE8
LinkDB
All DBs
AA seq
554 aa
AA seq
DB search
MPDQAEDKEAKWDTLVHSGVLFPPEYTSHGVQMLYDSKPVDLTLEQEEMATAMAVMTGTQ
YLERQQFLDNFWADWKKVLGPKHAIRDLKKCDFTPIYEWHMAERERKKALPKEEKDTMKK
EKEEAEAKFKHALVDDRKEQVGNFRVEPPGLFRGRGDHPKMGKFKRRIYPRDITINIGKG
VAVPEHPYPGQKWKEVRHDNTVTWLAFWKDPISAKDYKYVWLAANSTFKSDSDLAKYEKA
RKLKDYIGGIRKAYEKDWESADMRTRQMAVALYFIDKLALRAGHEKDEDEADTVGCCTLK
VENVEVLEDNHIKFDFLGKDSIRYENEVAVHPKVHSLVRQFCKTTKDNKIKKPDMDLFDT
MDATDLNKRLKDLMDGLSVKVFRTYNASVTLDALLHKESTTSTVDEKKAEYDRANKEVAI
LCNHQRSVPKGHTGQMQKMEAKLLEHQQQLDALERELTAARKGKAFEGAKARPVDSLERQ
IEKKRDALKKLELNAKVKEDLKTVALGTSKINYLDPRITVAWCKLHEVPIEKIFNKSLLS
KFHWSMDIEPEWRF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcaggcggaggacaaggaggcgaagtgggacacgctggtgcacagcggcgtg
ctgttccctcccgagtacacctcccacggcgtccagatgctctacgacagcaagcctgtc
gacctgacgctcgagcaggaagagatggcgactgcgatggcggtgatgacggggacgcag
tacctggagcggcagcagttcctggacaacttctgggcggactggaagaaggtgctgggg
cccaagcacgccatcagggacctgaagaagtgtgacttcacccccatctacgagtggcac
atggccgagcgcgaacgcaagaaggccctgccaaaggaggagaaggacacgatgaagaag
gagaaggaggaggcggaggccaagttcaagcacgccctggtggacgaccgcaaggagcag
gtgggcaacttccgggtggagccgccggggctgttccgcggccggggggaccaccccaag
atgggcaagttcaagcggcgcatctacccccgcgacatcaccatcaacatcggcaagggc
gtggcggtgccggagcacccgtacccggggcagaagtggaaagaggtgcggcacgacaac
acggtgacatggctggccttttggaaggaccccatcagcgccaaggactacaaatacgtc
tggcttgccgccaactccaccttcaagtccgactccgaccttgccaagtacgagaaggcc
cgcaagctcaaggactacatcgggggcatccgcaaggcgtacgagaaggactgggagagc
gccgacatgcgcacgcggcagatggctgtcgccctctacttcatcgacaagctggcgctg
cgagccggccacgagaaggacgaggacgaggcagacaccgtcggctgctgcaccctcaag
gtggagaatgtggaggtattggaggacaaccacatcaagtttgacttcctgggaaaggac
tccatccgctatgagaacgaggtggccgtgcaccccaaggtgcactccctcgtgcgccag
ttctgcaagaccaccaaggacaacaagatcaagaagcctgatatggacctgtttgacacg
atggatgccaccgacctcaacaagcgcctcaaggatctcatggacggcctctctgtcaag
gttttccgcacgtacaatgcgagtgtgacgctggacgcgctgctgcacaaggagagcacc
acatccaccgtggacgagaagaaggccgagtacgaccgcgccaacaaggaggtggcgatc
ctgtgcaaccatcagcgcagcgtgcccaagggccacacggggcagatgcagaagatggag
gccaagctgctggagcaccaacagcagctggacgcgctcgaacgcgagctcaccgccgca
cgcaaggggaaggccttcgagggcgccaaggcccgccccgtcgactcgctggagcggcag
atagagaagaagcgcgatgcgctgaaaaagctggaactgaacgccaaggtgaaggaggac
ctcaagactgtcgcgctgggcacctccaagatcaactacctcgaccctcgcatcaccgtc
gcctggtgcaaactgcacgaggtgcccatagagaagatcttcaacaagagcctgctctcc
aagttccactggtccatggacatcgagcccgagtggcgcttctga
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