Coccomyxa subellipsoidea: COCSUDRAFT_1550
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Entry
COCSUDRAFT_1550 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_1550
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_1550
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_1550
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
COCSUDRAFT_1550
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
COCSUDRAFT_1550
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCSUDRAFT_1550
Prokaryotic type
COCSUDRAFT_1550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1c
SLATT_4
Motif
Other DBs
NCBI-GeneID:
17042370
NCBI-ProteinID:
XP_005648524
JGI:
1550
UniProt:
I0Z011
LinkDB
All DBs
AA seq
569 aa
AA seq
DB search
QQGVLRLYNSLTKQKEVFMTVDPAGKRVTWYTCGPTVYDAAHLGHARYYVTMDILRRVIE
DYFGYDVDLVMNVTDVDDKIIRRARLNHLLEKYLAQTPDTAKVLQDAEAALSKLEAKQRA
AVSRVEAEQQKEGLNVQARCANKLRTLSHVTCELACPDIRTSLSQAPRTGTWSPAVQAIG
TRLNHAARYEADFLEDLHLLNCRPPDVLTRVSEYMDEIRAYVQQIHDNGMAYSVNGSVYF
DTQAYRSAAADGEANFASSDKRNKSDFALWKQAKAGEPAWESPDCARDEQGNLGKGRPGW
HIECSAMASSIFGPSIDLHTGGADLAFPHHENELAQAEAFYHEEYAKCNCEPQWVNYFLH
AGHLNIDNLKMSKSLKNFISIRKALEDFSPRVLRIMFTLAPWDKSMTYKEEKSALEARQK
EKTFVNFFLEVEAVLHKFGREGLEGRLPSRWEAEEKELSRALVGTREKVHAALQDSIDVC
TAMSALLDLVSTTNVYIKAREQQYAATPKGPPPQAQLVHKVAAYITEILRVFGIAEEDQI
GLGRERGAAAAAVAGEGAEPLLGVIADFR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
cagcagggtgtcttgaggctgtacaattcactaacaaaacaaaaggaggtgttcatgacc
gtggatcctgccggaaagcgtgtcacatggtacacctgtgggcccactgtatacgatgca
gcccacctggggcacgctcgttactatgtgacgatggacatcctgaggagggtgatcgag
gattattttggatacgacgtggatctggttatgaacgtgactgatgtcgacgacaagatc
atacgcagagcccgtctcaaccacctcttggagaagtacctggctcagacacctgacaca
gccaaggtcctgcaagatgcagaagcagcgctgtccaaactggaagcaaagcagagagca
gcggtgagcagagtggaggcggagcagcagaaggaggggctgaacgtccaagccaggtgc
gccaataagctgcgcactctgtcacatgtcacatgcgaactggcatgcccagatattagg
acttcactgtcacaggcaccgagaacgggaacgtggagtccagcagttcaagccataggg
accagattgaaccatgcagcgcgctatgaagcagactttctggaggacttgcacctgctc
aactgcagaccgccagatgtgctgacgcgagtgagcgagtacatggatgagatcagggcc
tatgtgcagcagatccatgacaatggcatggcctatagcgtcaatggcagcgtctacttt
gacacccaggcctacaggtcagcggcggccgacggtgaggcaaattttgccagcagcgac
aaaaggaacaagagcgactttgcgttgtggaagcaggccaaggccggggagcctgcctgg
gagtcgcctgactgcgcgcgggatgagcagggtaaccttggcaagggcaggccaggctgg
cacattgagtgctcggcaatggccagcagcatctttgggccaagcattgatctccacaca
gggggagctgacctggccttcccccaccatgagaatgagctggcacaagctgaggccttc
tatcacgaggaatatgcgaagtgcaattgcgagccgcagtgggtcaactacttcctccat
gcagggcacttgaacattgacaacctgaagatgagcaagtccttgaagaatttcatcagc
atcaggaaagctcttgaggacttcagccctcgcgttctgaggatcatgtttaccttggcg
ccctgggacaagagcatgacctacaaggaggaaaagagtgcactggaggcgcggcagaag
gagaagacctttgtgaacttcttcctggaagtggaggccgtgctgcacaagtttgggcgc
gagggcttggagggcagactgccctccagatgggaggctgaggagaaggagctgagtagg
gccctcgtgggcaccagagaaaaggtgcatgcagcgctgcaggacagcatcgatgtttgc
acagccatgagcgccctgctggacctggtcagcaccaccaatgtctacatcaaggcccgg
gagcagcagtatgctgccactcccaaggggccgccgcctcaggctcagctggtgcacaag
gtggccgcctacatcacagagatcctgcgcgtgtttggcatcgccgaagaggatcagatt
gggctgggccgggagcgtggcgcggcggcggcggccgtcgcgggcgagggcgcagagccg
ctccttggcgtcatcgcagatttccgc
DBGET
integrated database retrieval system
