KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_16118
Entry
COCSUDRAFT_16118  CDS       T02914                                 
Name
(RefSeq) splicing factor
  KO
K12840  splicing factor 45
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_16118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_16118
Spliceosome [BR:csl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    COCSUDRAFT_16118
 Complex B
    COCSUDRAFT_16118
SSDB
Motif
Pfam: G-patch RRM_1 G-patch_2
Other DBs
NCBI-GeneID: 17040796
NCBI-ProteinID: XP_005647353
JGI: 16118
UniProt: I0YWP0
LinkDB
AA seq 281 aa
MCTVAGDRGQGPSSSSVVVVREDADEYDPGRPNDFEEVRRSREVQRKEAELEVGRQERLR
LEALQQQVGRDLINLNISGEEAFLQRARISNRGGTSGVTGRDSKDSKGLSFAERMMEKMG
WKEGQGLGKSKQGIVTPLIAQKTDSRSGVIVNASSSAAHQDKRPRVGTSFQGPPSRVVLL
RNMVGPGEVDEELEDEIGLECSKFGNVQSVMIFEVTEPGFPAEQSVRIFVEFDREEGATK
AVVDLGGRFFGGRTVQATFFDLSRWGRKDLAPNAEELSTFR
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtgtacagttgcaggtgaccgaggtcagggcccgagctcatctagcgttgttgtagtc
agagaggatgcagatgagtatgacccaggccgtcctaatgattttgaggaagtgcggagg
tcccgcgaggtacagcgcaaggaagcagagcttgaagtggggaggcaggagcgtctgaga
ttggaggctcttcaacaacaggtgggcagagatcttataaatctgaacataagtggagaa
gaagccttcctccagagggcacggattagcaacaggggaggcacatcaggggtcacaggc
agagattctaaggattccaaaggtcttagctttgctgagcggatgatggaaaaaatgggt
tggaaggagggtcagggtctggggaaatccaagcagggcattgtcacgcctctcattgcg
cagaagacagattcacgcagcggtgtcattgtaaatgcctcgagcagtgcagctcatcaa
gacaagcggcctcgcgtcggaacctccttccaaggtccacccagccgtgtggtcctattg
cgcaacatggtgggacccggggaggtggacgaagagctggaggatgaaattgggctggag
tgctccaagtttggaaatgtgcagagtgtcatgatttttgaggtgaccgagcccggattt
cctgcagaacagtctgtgcggatatttgtggagtttgacagggaagaaggggccaccaag
gcagtggtggacctggggggccgattctttggtggccgcacggtccaggcaaccttcttt
gatctcagcaggtggggccgcaaagacttggcgccaaatgccgaggagttgtcaactttc
agatga

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