Coccomyxa subellipsoidea: COCSUDRAFT_16525
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Entry
COCSUDRAFT_16525 CDS
T02914
Name
(RefSeq) 1-deoxy-D-xylulose 5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00730
Thiamine metabolism
csl00900
Terpenoid backbone biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Module
csl_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
COCSUDRAFT_16525
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
COCSUDRAFT_16525
Enzymes [BR:
csl01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
COCSUDRAFT_16525
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SSDB
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Paralog
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
Motif
Other DBs
NCBI-GeneID:
17040355
NCBI-ProteinID:
XP_005646913
JGI:
16525
UniProt:
I0YVF0
LinkDB
All DBs
AA seq
732 aa
AA seq
DB search
MLAGLAGYSGFRRNASKARKADLRAKQGAGRRSLRVAAEVEWDKLSSDDIETWMDNGSPP
TPLLDTVNFPVHLKNFNMGQLRQLCKELRSDIVHTVSKTGGHLGASLGVVELTVALHYVM
NTPDDKIVWDVGHQAYGHKILTGRRSRMPTIRQTGGLSGFTNRAESEYDPFGAGHSSTSI
SAALGMAVARDFKASTTSHDSNKYLCGRKNHCVAVIGDGAITGGMAYEAMNHAGFLDKNM
IVVLNDNQQVSLPTQYNGKNQDPVGALSGALARLQANRPLRELREIAKGVTKQLPEPIQE
ATAKIDEYARGMISGSGSTLFEELGLYYIGPIDGHNLELLITMLQEVKSTETVGPVLIHI
ITEKGHGYEPAVLASDKMHGVAKYDIATGKQSKPKAKSGSYTNYFADALIAEAELDSRVV
GIHAAMGGGTGMNRFEQRYPERTFDVGIAEQHAVTFAAGLAAEGMIPMCAIYSSFLQRGY
DQIVHDVALQKLPVRFAMDRAGLVGADGATHSGFADVTYMGVLPNMIIMAPSNEAELCNA
VATSVAIDDQPSCLRFPRGNGLGVDFAAYGVSEKLKGTPWQIGKGVVRKGGKDVALVCYG
TMTNNGLAAAEMLEKSGVTATVADMRFCKPLDMPLLRQMAREHPVMITVEENGIGGFGSH
VMHNLALEGLLDGNLKFRPMTLPDRFIEHGSQTDQLAEAGLSASHIAATALTLLGRKKDS
VALLQNGWTARL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaggtttggcaggatattcaggattcaggaggaatgcatcgaaggcccggaag
gctgatttaagggcaaagcagggtgctggcagaaggagtttgagagtggcagcagaggtt
gagtgggacaagctcagctcagatgacattgagacatggatggacaatggcagtccgcca
acaccactcctggacactgtgaacttccctgtgcacctgaagaacttcaacatggggcag
ttgcggcagctgtgcaaggagctccggtcagacattgtgcacacagtgtcgaaaaccgga
gggcacttgggggcatcattgggtgtggtggagctcacagtggcattgcactatgtgatg
aacactcccgatgacaagattgtgtgggatgtgggccaccaggcttatggccacaagatc
ttgacgggacggcgaagcaggatgcccaccatccgccaaactggtggcctctcagggttc
acaaaccgcgctgagagcgagtacgacccctttggagctggccactcgtccacttccatc
tcagcagctcttggaatggcagtggctcgcgacttcaaggcaagcacaacatctcacgac
tccaacaagtatctgtgtggtcggaagaaccactgtgtggcagtgatcggcgatggcgcc
atcacaggcggcatggcatacgaggccatgaaccacgcgggtttcctggacaagaacatg
atcgttgtcctgaatgacaaccagcaggtgtcgctgcccacgcagtacaatgggaagaat
caggaccccgtgggtgcgctgtcaggagcgctggcccgtttgcaggccaaccggcccctg
cgcgagctgcgtgagatcgccaagggcgtcacaaagcagctgccagagcccatccaggaa
gccacggcaaagattgatgagtatgcgcgcggcatgatcagtgggtcaggctcgacccta
ttcgaggagctgggcctgtactacattggtcccattgacggccacaacctggaactcctc
attaccatgttgcaagaggtgaagtcgacagagacggtggggcctgtgctgatccacatc
atcaccgagaagggccacggctacgagccggcagtgctcgcatcggacaagatgcatggc
gtggcaaagtacgacatcgccaccggaaagcagagcaagcccaaggccaagtctggcagc
tacacaaattactttgcggacgcgctgatcgcggaggctgagctggacagccgcgtggtg
ggcatccacgctgccatgggcggcggcactggcatgaaccgcttcgagcagcgctacccc
gagcgcaccttcgacgtcggcatcgccgagcagcacgcagtgacgtttgcggcgggtctg
gcggcggaaggcatgatccccatgtgcgccatctactcctccttcctgcagcgcggctac
gaccagatcgtgcacgacgtggcgctgcagaagctccccgtccgcttcgccatggaccgc
gccggcctcgtgggcgccgacggcgccacccacagcggcttcgctgacgtcacttacatg
ggcgtcttgcccaacatgatcatcatggctccctcgaacgaggcggagctgtgcaatgca
gtggcaacttcggtggcgattgacgaccagccgtcctgcctgcgcttcccgcgtggcaac
ggcctgggagtggactttgccgcctatggcgtgtccgagaagctgaagggaaccccctgg
cagatcggcaagggagtggtaaggaagggcggcaaggacgtggccttggtgtgctatggg
accatgaccaacaacggcctggcagccgctgagatgctggaaaagagcggcgtcaccgcc
accgtcgcagacatgcggttctgcaagccgttggacatgccgctgctgcggcagatggcg
cgcgagcacccggtcatgatcaccgttgaggagaacggcatcggcggctttggctcccac
gtgatgcacaacctggcgctggagggtctgctggacggcaacctcaagtttcggcccatg
acgctgccggaccgattcatcgagcacggcagccagaccgaccagctggctgaggccggc
ctctccgcctcccacattgccgccaccgcgctcacgctgctcggccgaaagaaggacagc
gtcgctctcctccagaatggctggactgcccgcctctga
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