Coccomyxa subellipsoidea: COCSUDRAFT_16778
Help
Entry
COCSUDRAFT_16778 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_16778
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_16778
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_16778
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
COCSUDRAFT_16778
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class II (U)
COCSUDRAFT_16778
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCSUDRAFT_16778
Prokaryotic type
COCSUDRAFT_16778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
bDLD2
Motif
Other DBs
NCBI-GeneID:
17040279
NCBI-ProteinID:
XP_005646837
JGI:
16778
UniProt:
I0YV74
LinkDB
All DBs
AA seq
494 aa
AA seq
DB search
MSALERLILQTLDKDGEIGDSKDFASTSGYDHKEVVGSIKSLQSYEMIISKAREIPHSRN
VLTEEAQGYRDHGSPEAKLFAALPPEGILMKDLTANFGDKAFAPARKYGWVGMQKVEDGQ
QVVVRETEAIEDTTQNLLKQISEGQAVNRKDLEALGKRKLVKAETWKTYALKKGVKFALE
KKKPATELTHEMLQKGSWKDADFKPYNFNALGQPTNGGHLHPLLKVRTQIRKAFTSMGFE
EMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFLTNPAATPLSKQPQDYVQRVRETHEN
GGFGSIGYGSHWKESEAEKNLLRTHTTAVSSRMLYKLAQEGFKPAKYFSIDRVFRNEAID
RTHLAEFHQIEGVVCDKGLTLGDLIGTLHLFFSRLGLPKLRFKPAFNPYTEPSMEIFSYS
EQLGKWVEVGNSGMFRPEMLRPMGLPEDVNVIAWGLGLERPTMILYGIDNIRDLFGHKVS
LSVVKKNPICRLNL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttggagagactcatcttgcagacactagacaaggatggagaaatcggtgat
tcgaaagatttcgcgagcacatcaggctatgatcacaaggaagtcgttggaagcatcaag
agcctccaatcttacgagatgataatatcaaaggcaagagaaatcccccactctagaaat
gtgctgacggaggaggcacagggctatagggatcacggatctcccgaggcaaaattgttt
gcagcacttccgcctgaagggattttaatgaaggatctgacggccaacttcggagacaaa
gccttcgcgccagcaaggaagtatggatgggtaggcatgcaaaaggtggaagatggacaa
caagtggttgtgcgcgagacagaggcaattgaggacaccacacagaaccttctgaaacag
atctcagagggtcaggcggtgaaccggaaagacttggaggccctgggaaagaggaagcta
gtgaaggcagaaacatggaagacgtatgccttgaagaagggtgtaaagtttgctttggaa
aaaaagaagccagccacagagctaacacatgagatgctccaaaagggctcctggaaggat
gccgacttcaagccatataacttcaatgctcttgggcagcccaccaacggaggccacttg
catccactgctgaaggtgcggacccagatcagaaaggccttcaccagcatgggcttcgag
gaaatgcccaccaataattatgttgagagcagcttctggaattttgatgcgctattccag
ccacagcagcacccagctcgagatgcccatgacaccttcttcctcacaaatccagcagcc
acgccgctttcaaagcagccacaggactatgtgcagcgcgtcagggagacccacgagaat
ggcggctttggctccattgggtacgggtcgcactggaaggagtcagaggcggagaagaac
ctgctgcgcacgcacacgacggcagtgtctagccgcatgctgtacaagctggcgcaggag
ggcttcaagcccgccaagtacttctccattgaccgcgtgttccgcaatgaggccatcgac
cgcacccacctcgctgaattccaccagatcgaaggcgtggtgtgcgacaaggggttgacg
ctgggggacctgataggcacgctgcacctgttcttcagccgcctgggcctgcccaagttg
cgcttcaagcccgccttcaacccctacacggagccctccatggagatcttctcctacagc
gagcagctgggcaagtgggtggaggtgggcaactccggcatgttccgcccagagatgctg
cgccccatgggcctcccagaagacgtcaatgtcatcgcctggggcctcggcctggagagg
cccaccatgatcctgtacggcattgacaacatcagggacctgttcggccacaaggtcagc
ttgtcagtggtgaagaagaaccccatctgtcggctgaatctgtag
DBGET
integrated database retrieval system